Parus major (Great Tit): 107209586
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Entry
107209586 CDS
T04864
Symbol
SPATA5L1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmaj03009
]
107209586 (SPATA5L1)
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
107209586 (SPATA5L1)
Ribosome biogenesis [BR:
pmaj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
107209586 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_14
AAA_33
AAA_2
AAA_22
Rad17
TIP49
Vps4_C
AAA_7
DUF815
RNA_helicase
bpMoxR
TsaE
NTPase_1
AAA_18
AAA_3
nSTAND3
DUF6497
ATPase_2
AAA_19
IstB_IS21
AAA_17
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
107209586
NCBI-ProteinID:
XP_015494970
Ensembl:
ENSPMJG00000019190
LinkDB
All DBs
Position
10:10069027..10076456
Genome browser
AA seq
759 aa
AA seq
DB search
MEAAVLKLLPLDPGDEGTQRCRLGPAALSFLGARIGAPLRISVPGGCCVCTAWPRHDLAD
GYLQADLSCSTAGLRARDLRGLSLSLGRLQLLPSRQLRTATLRVVLKSAALKKSTPRAVL
QETIRELLRNVYVLPRYVVTVAPSPENPVVYIEILSASPLKEEAGLITPQTSIKIKEVIT
LEWYRHLSEDTAKSSVAGLDDVGKSLKEMIDLPFRFPKTFKKLGLSVPNGVLLIGPPGVG
KTLMVKAVAKELGAYLFGISGPALHGSRPGEGEENLRRVFEKGREMSNEGPTILFFDEID
SLCPKRGSSNNAPEDRIVAQLLTLLDGVGSEGKMVIVAATNRPDALDPALRRPGRFDREV
IIGTPTVTQRRSILQLLTSDMPISAEVDLAKLAEMTTGYVGADLTALCREAAMQAVSHSS
LDSAESETVINMGDFQEAFKKIQPSSFRSAVGLTECKPVTWEQIGGLEDVKLKLKQSIEW
PMKFPEAFARMGLSHPKGILLYGPSGCAKTTLVKAVATSCHCSFLSVSGADLFSPYVGDS
EKILSQVFRQARANTPAIIFLDEIESILGSRAHCRTGHGVSERVLSVLLNELDGVGLKVT
ERRGCKLQLEAQCQEQSDEERKLEFQETLNKDFMVVAATNRPDMLDDALLRPGRLDKMIY
IPPPDLKGRLSILKICTEKIPLDTDVSLQDVAVLTDLFSGADIENLCKEAALLALQENGL
EATAVKQEHFVKSLKTVKPSLIIKDLEFYEKFSNQELAS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcagtcttaaagctgctcccgctggacccgggagatgagggcacccagcgg
tgccggttgggacctgccgcgctctccttcctgggagccaggatcggcgccccgctgagg
atctctgtgcctggcggctgctgtgtgtgcacggcgtggccccggcacgacctggcggac
gggtacctgcaggccgacctcagctgcagcaccgcggggctgagggcgcgggacctgcgc
ggcctctcgctgagcttgggccggctgcagctgctgccctcccgacagctgcgaacagcg
actctgagagtggtcctcaagagcgccgcgctgaaaaagtcgactcccagagcggtgtta
caggagacaatcagagagctgctaagaaatgtatacgttttgcctcgttatgttgttact
gttgcaccgagtcccgaaaatcctgtggtgtatattgaaatactatctgcatctcctttg
aaggaggaagctggattgataactccccaaacaagcataaaaattaaggaggtgatcact
ttagaatggtacaggcatctgtcagaagacactgcaaaaagttcagttgcaggactagat
gatgtggggaagtctttgaaagaaatgattgatctgcctttccgctttccaaaaactttc
aagaagcttggactttctgtccctaatggagtgctattaattgggccccccggtgtaggg
aaaactctgatggtaaaggcagtagcaaaagagctgggtgcctatctgtttggcatcagt
ggcccagccctccatggttcaagaccaggagagggtgaagagaatttgcgaagagttttt
gaaaagggcagagagatgtcaaacgaaggcccaaccattctcttttttgatgagattgat
tctttatgcccaaagcgaggaagttcaaacaatgctcctgaagatcgtattgttgctcag
ttgctgacgctgttggatggtgtagggagtgagggtaagatggtcattgtggcagcgaca
aacaggcccgatgccttagaccctgcactgagacgacctggcagatttgacagagaggtt
attattgggaccccaacagttacacagagaagatccatcctgcagttgcttacatctgat
atgcccatttctgcagaggttgatttggctaagctggcagaaatgacaactgggtatgtt
ggagctgaccttacagcactctgcagagaagctgctatgcaggctgtgtcccacagctct
ttggattcagctgaaagtgaaaccgtgattaatatgggagatttccaagaagcttttaaa
aaaattcaaccatcctcttttcgaagtgcagttggactaacagagtgtaaacctgtgact
tgggagcaaattggtggtcttgaagatgtgaaattaaagttaaaacagagtattgagtgg
cctatgaaatttcctgaggcatttgccaggatgggcctgtctcatcccaagggtattctt
ctctatgggccatctggctgtgccaaaaccacactggtgaaagctgtggccacaagttgt
cactgttcctttctctctgtaagtggtgctgacctgttctcaccttacgttggagattca
gagaagattttgtctcaggtttttcgccaagcgagagcaaatactccagcaataatattc
ctagatgagatagaatcaatcttgggatctcgggcacactgcagaactggccatggtgtc
tcagagcgggttctttctgttcttctcaatgaattggatggggttgggctgaaagttaca
gaaagaagaggatgcaagctacagcttgaggctcagtgtcaagaacaaagtgacgaggaa
agaaagctagagtttcaggaaactttgaacaaagatttcatggtagttgctgcaacaaat
agaccagatatgttggatgatgctttgctccgtcctggaaggctggacaagatgatctat
attccacctccagatctgaagggaagactttccattttgaaaatctgcactgaaaaaatt
ccgttagatactgatgtgtcattacaagatgtggcagtcctaacagacctcttctctgga
gctgatattgaaaatctttgcaaggaggctgctttgttggcattgcaagagaatggactt
gaagcaactgctgtgaaacaggaacattttgtgaaatcgttgaagactgtaaaaccatct
ttaatcataaaagacttggaattttatgaaaaattctctaatcaagaattagcctcttga
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