Petromyzon marinus (sea lamprey): 116952813
Help
Entry
116952813 CDS
T09614
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04260
Cardiac muscle contraction
pmrn04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116952813
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116952813
04261 Adrenergic signaling in cardiomyocytes
116952813
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116952813
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116952813
BRITE hierarchy
Motif
Pfam:
VGCC_alpha2
VWA_N
dCache_1
VWA_3
VWA_2
VWA
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
116952813
NCBI-ProteinID:
XP_032828373
EnsemblRapid:
ENSPMAG00000015137
LinkDB
All DBs
Position
48:complement(10807923..11004857)
Genome browser
AA seq
1123 aa
AA seq
DB search
MRGWESASVESEREVSMAGRRLRRLSSLGVAPWLALSTALLFAVSPMDGVHGAPRIPAET
VKLWASAFGGEIKSISSRYSGSQFLQKKYKESEKRVRIDEVDGLQLVKKIAKNMETMFSK
KVTAVKRLVEAAEEANMNHTFDENLEYPYYTALSMQDERDNYGLELGLEPNEHYNNMSVN
TSLSGVQVPTNVYNKDPAVINGALWSSALNAVFVNNSRRDPTLTWQYFGSVDGFFRQYPG
VKWEADENSEGGVIEYDCRNRGWFIQASTSPKDVVILVDVSGSMKGLRMTIAKRTVISIL
ETLGDNDFFNIIGYNDFLHYVEPCLNETLVQADRDNREHFKKQTEKLLAKGTGLLENALD
RAFSILNEFNRTGQGSQCSQAIMLITDGATDTYDNVFNTYNRPHRRVRLFTYLIGREVAF
ADSVKWMACSNKGYYSRISTLANVPENVMHYLPVLSRPMAISRGHTVIWTEAYTDYTLPQ
AQKLLTLASQDHFLKTSVAMPVFSGKSDMKSRGVLLGVVGLDVPLKDILRVVPRYKLGEH
GYAFAITNNGYILSHPDQRPLYREGGKFKAKPHSVDLLEVEWGEQDDVLRAAMVNRQTGS
YSSNIRMNVPISEERVLPLTKEFYYTDIKNTPFSLGIVVGGSYGKFIFSANVSLAEALED
LAHPDVMLSNEWTYCHTEEDPHLHKVSQLESVQRYLSGEKLGLRCNNELIRQVMFDAVVS
APLEAYWTNLMLNKSQNLELGVEQAFLGTRSGLLRKAEFLGSEKITDRDFLTDDQKDTLF
TVERFPLWFRRASALPPGNFIYSVPFKAGTTNRSTVVTASTAITVSANRRMATAAVVGIQ
MKLDYFQQKFWTATKQRDDADCTTVDGKCPISMDDENLRCYLIDNNGYIMVSKSYEETGR
FLGEVDGTVMKKLLTMGIFQRVTLYDFQAMCRLVPDSHSSRAGLSVPTPYQSLSALVKWL
ITELAMLVLEFNLSGLWRPEHAATAQKVRRQDLLQPCHKQYPAFSAAPTLKENSGVIDCG
DCERMFVIQQVPGSNLLLLVVDTECRCDNMFRMGLHPVEIKQNESSRCERLRSQKLRRRP
DQCYAFHSEEDAAECGGAARPGVWASTLLTTLALTSTALHAVG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgagggggtgggagagcgcgagtgtcgagagcgagagagaggtaagcatggctgggagg
aggttgcggaggctgtcctcgctcggagtcgccccgtggcttgctctctccactgctctg
ctgttcgcagtatcgcccatggatggagtccacggagccccgcgcatccccgcggaaaca
gtgaagctctgggcctctgcctttggaggagagatcaagtccatctccagcagatactcg
ggatcccagttcctccagaagaaatacaaggagtcagagaagagggtgcggatcgacgag
gtggatggcctgcagctagtgaagaagattgccaagaacatggaaacgatgttcagcaag
aaggtgactgcggtgaagcgcctagtggaggccgcggaagaggcgaacatgaaccacacc
ttcgacgaaaacctcgagtacccctactacacggcgctgagcatgcaggacgagagagac
aactacggcctggagctgggcctggagcccaacgagcactacaacaacatgtcagtgaac
acgagcctcagcggggtacaggtgcccaccaacgtctacaacaaggatccggcggtcatc
aatggtgcgctgtggtcgtcagcgctaaacgctgtcttcgtgaacaactcccggcgcgac
cccacgctgacctggcagtacttcggcagcgtcgacggattcttccgccaataccctgga
gtaaagtgggaggcggatgaaaactcagaaggaggggtcattgagtacgactgcaggaac
agaggatggttcatacaggcgtccacgtctcccaaggacgtggtcatcctggtggacgtg
agtggcagcatgaagggcctgcgcatgaccatcgccaagcgcaccgtcatctcgatcctg
gagacactcggagacaatgacttctttaacatcatcgggtacaacgacttcctacactac
gtggagccgtgcctcaacgagacgctggtgcaggccgaccgtgacaatcgtgagcatttt
aagaagcagacagagaagctgctggcgaagggaaccggactgctggagaacgccctcgac
agagcgttcagcatcctcaacgagtttaaccggacgggccaaggcagccagtgtagccag
gccatcatgctcatcactgacggcgccactgacacctacgacaacgtgttcaacacctac
aaccggccccaccgcagggtgcgcctcttcacctacctgatcgggcgggaagtggcattt
gcggacagcgtgaagtggatggcgtgcagcaacaaaggctactactcgcgcatctcgacg
ctggccaacgtgcccgaaaacgtgatgcactacctgccggtcctgagccgtcccatggcc
atcagccgcggccacacggtcatctggaccgaggcctacactgactacacgctgccacaa
gcacagaagctgctcacgctggcgtctcaggatcacttcctcaagacgtccgttgccatg
ccggtcttcagcggcaagtccgacatgaagtcacgtggtgtgctgctcggcgtggtggga
ctcgacgtgccgctgaaggacatcctgcgtgtggtccctcgctacaagctgggggagcat
ggctacgcgtttgccatcaccaacaacggctacatcttgagccaccccgaccagagacca
ctgtacagagagggagggaaattcaaggccaagccgcatagcgtcgacctgctggaggtg
gagtggggcgagcaggatgacgtgttgcgggcggcgatggtgaacagacagacaggttcc
tactcctcgaacatacggatgaatgtcccgatctcagaggaaagggttttgccgctgacc
aaggaattctactacacggatatcaagaacacgcccttcagccttggaattgtcgtgggt
ggctcctatgggaagttcatcttcagcgccaacgtctccctggccgaagccctggaggac
ctggcccaccctgacgtgatgctctccaacgagtggacgtactgccacacggaagaggat
ccacacctgcacaaggtgtcccagctggagtcggtgcagagatacctgtctggggagaag
ctcggactccgatgcaacaacgagctgatccgccaggtgatgttcgacgcggtggtgtcg
gccccgctggaggcctactggaccaacctcatgctcaacaagtcccagaacctggagctg
ggcgtcgagcaggccttcctcgggacacggtcggggctcctgaggaaagccgagttcctg
ggatcggagaagatcaccgacagagatttcctgacggacgaccagaaggacaccctcttc
acggtggagcgtttccccctatggttccggcgtgccagcgctctgccgcccggcaacttc
atctactcagtgcccttcaaggccggcaccaccaacaggagcacggtggtgactgccagc
acagcgatcaccgtgtcggcaaaccggcgcatggccacagccgccgtggttgggatacag
atgaagctcgactatttccagcagaaattctggacggcgacaaaacagcgtgacgacgcc
gattgcacaacggtcgacgggaagtgccccatcagcatggacgatgagaatctccgatgc
tacctcatcgacaacaacggctacataatggtctccaagtcgtacgaggagacgggacga
ttcctcggggaggtcgacggcaccgtgatgaagaagcttctgaccatggggatattccag
cgggtgacgctctacgacttccaggccatgtgccgcctcgtgccggactcgcactcgagc
agggccggactcagcgtgcccacgccctatcagtctctctccgcgttggtcaagtggctc
atcacagagctcgccatgctggtgttggagttcaacttgtcaggcctgtggaggcccgag
cacgccgcgacagcccaaaaggtgcgccggcaggacctgctgcagccgtgccacaagcag
tacccagcgttcagcgcagcgcccacgctcaaggagaacagcggcgtcatcgactgcggc
gactgtgaaaggatgtttgtgatccagcaggtgcccggcagtaacctgctgctgctcgtg
gtggacacggagtgccgctgtgacaacatgttcaggatgggcttgcaccccgtcgagata
aagcaaaacgagtccagccgctgtgagaggctccgctcgcagaagctgagacggaggccg
gaccaatgctacgccttccactcggaggaggatgcggccgagtgcggtggagcggcccgg
cccggcgtgtgggccagcacgctgctcaccacgctggcgctcaccagcacagccctgcac
gcagtcgggtga
DBGET
integrated database retrieval system
