Pectobacterium parmentieri RNS08.42.1A: A8F97_01655
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Entry
A8F97_01655 CDS
T04513
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ppar
Pectobacterium parmentieri RNS08.42.1A
Pathway
ppar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8F97_01655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppar03019
]
A8F97_01655
Messenger RNA biogenesis [BR:
ppar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A8F97_01655
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AOR57618
UniProt:
A0A0H3I8D2
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Position
378177..378713
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AA seq
178 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGESPEQAMFRELFEEVGL
RKKDVRVLASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCNESDINMQSSGTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFINPVILLQESVAVRMAPPPPGPRRKRG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccaaacgttggtattgtaatttgtaatcggcagggg
caggtgatgtgggcccggcgctatggccagcactcatggcaatttccgcaggggggaatt
aaccccggtgaaagtcccgagcaagcgatgttccgcgaactgtttgaggaagtcgggtta
agaaaaaaggatgtgcgcgtgttggcatctacccgtaactggttacgctataaattacca
aagcgtttggtgcgttgggatacaaaaccggtctgtatcggccaaaagcagaaatggttt
ttgctacagttgatgtgtaatgagtcggatattaatatgcagagcagcggcacgccggaa
tttgatggctggcgctgggtgagttactggtatccggtacgtcaggtcgtctcttttaag
cgggatgtgtatcgtcgcgtgatgaaggaatttatcaacccggtgatcctgcttcaggag
agtgttgcggttcggatggcgccccctccacccggtccccggcggaaaagagggtaa
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