Podospora pseudocomata: QC762_400310
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Entry
QC762_400310 CDS
T09797
Symbol
DBP3
Name
(RefSeq) RNA-dependent ATPase
KO
K14811
ATP-dependent RNA helicase DBP3 [EC:
5.6.2.7
]
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsd03009
]
QC762_400310 (DBP3)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC762_400310 (DBP3)
Ribosome biogenesis [BR:
ppsd03009
]
Eukaryotic type
Pre-60S particles
Helicases
QC762_400310 (DBP3)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
MatB
Motif
Other DBs
NCBI-GeneID:
87909391
NCBI-ProteinID:
XP_062742981
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All DBs
Position
4:114451..116320
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AA seq
581 aa
AA seq
DB search
MSAGKKHARPDGEEQAVRSSKKAKTDEVANATTDADGSDLKAEKKKQKKDKKGKEKRERG
EKKERKENKENKEDADKQQDTEIPDADADAESGPKAEKTDKKKDKKKSNKSKSSEEPIAS
ASDDEIKAYLTKEEIKIEDPSNSPLQPILKFTQLPTSKLIAKKPFAAYNAPTPIQAASWP
FTLAGRDAIGIAETGSGKTMAFALPCVEKLSIHSKKASKDYRSTRPRAVIVAPTRELAMQ
THEAVSGLASQVGLTAVCIYGGASKDDQRALLRKNSGADIITATPGRLKDFLSDNTVNLG
DVMFAVLDEADRMLDKGFEDDIKLILGGCPPKEERQTLMFTATWPTSVRVLAESFMVNPV
KVTIGNRTRAGEDGNSSGTVELQANSRIEQKVEVVDPRGKEQRLLELLREAQKGSAKNDR
ILVFCLYKKEAVRVEQFLERRGIRVASIHGDLRQDQRTKSLEAFKAGTTSVLVATDVAAR
GLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKTGKAITLFTEHDKAHSGSLVNILKAA
KQDVPEDLLKFGTTVKKKAHDSYGAFYKDVDMTKKATKITF
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccggaaagaagcacgcccgtcccgacggggaggagcaggccgttcgctcctcc
aagaaggcaaagaccgacgaggttgccaatgccacgaccgacgccgatggctccgacttg
aaggccgagaagaagaagcagaagaaggacaagaagggtaaggagaagagggaaaggggg
gagaagaaggaaaggaaggagaacaaagagaacaaggaggacgccgacaagcaacaagac
accgagatccccgacgccgacgccgacgccgagtcggggcccaaggctgagaagacggac
aagaagaaggataagaagaagtctaacaagtccaagtcatccgaggagcctatcgccagc
gcttccgatgacgagataaaggcttacctgaccaaggaggagatcaaaatcgaggacccc
tccaacagccctctgcagcccatcctcaagttcacccagcttcccacctccaagctcatc
gccaagaagcccttcgccgcctacaatgcccccactcccattcaggccgcttcctggccc
ttcacccttgccggccgcgatgcgatcggtattgccgagacgggttctggaaagaccatg
gccttcgctctgccctgtgtcgagaagcttagcatccactccaagaaggcgtccaaggac
taccgcagcacccgcccacgcgccgtcattgtggcacccacccgtgagctggccatgcag
acgcacgaggctgtctctgggctggcttctcaggtcggtctcacggccgtctgcatctac
ggtggcgcgagcaaggatgaccagcgcgcgcttctgcgcaagaacagcggtgccgatatc
atcacggcgacccccggcagattgaaggacttcctttccgacaacactgtcaacctcggc
gacgtcatgtttgccgtgctcgacgaggccgatcgcatgctggacaagggtttcgaggac
gacatcaagctgatcttgggcggctgcccgccaaaggaggagcgccagaccctgatgttc
actgcgacatggccgacaagtgtgcgtgttctcgccgagagcttcatggtcaaccccgtc
aaggtcaccattggcaaccgcactcgcgccggcgaagatgggaacagcagtggtaccgtc
gagttgcaagccaacagcagaatcgagcaaaaggtcgaggtcgtcgatccccggggcaag
gagcagcggctcttggagcttctccgtgaagcacagaagggctctgccaagaacgacagg
atattggtgttttgcctgtacaagaaggaggcggtgcgcgtggagcagttcctcgaaagg
cgaggcatccgcgtcgctagtatccacggtgacctccgacaggaccagcgtaccaagagc
ctggaggccttcaaggccggtaccacatcggtgctggttgctacagatgttgccgcccgt
gggttggatatccccgaggttaagcttgtcatcaacgtcaccttccccttgaccatcgag
gactatgtccaccgcattggccgaacaggccgtgccggaaagacaggcaaggccatcacg
ctgttcaccgagcacgacaaggcgcactctggctccctcgtcaacatcctcaaggccgcc
aagcaagacgtgccagaagatctcttgaagtttggcaccaccgtcaagaagaaggcccac
gactcgtatggtgctttttacaaagacgtggacatgaccaagaaggcgaccaagattact
ttctaa
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