Persicobacter psychrovividus: PEPS_01740
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Entry
PEPS_01740 CDS
T09740
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsv03032
]
PEPS_01740
03036 Chromosome and associated proteins [BR:
ppsv03036
]
PEPS_01740
03400 DNA repair and recombination proteins [BR:
ppsv03400
]
PEPS_01740
DNA replication proteins [BR:
ppsv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PEPS_01740
Chromosome and associated proteins [BR:
ppsv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PEPS_01740
DNA repair and recombination proteins [BR:
ppsv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PEPS_01740
BRITE hierarchy
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
ORC2
PqqD
DUF2267
KilA-N
DUF937
Plug
Lyase_aromatic
PhageMin_Tail
Motif
Other DBs
NCBI-ProteinID:
BDC97893
LinkDB
All DBs
Position
202561..202854
Genome browser
AA seq
97 aa
AA seq
DB search
MTKADVISQIAEQTGIDKADVQETVEAFFQVVKNSMANGENIYVRGFGSFVNKKRARKVA
RNISQNTAIVIDEHYVPAFKPSKVFVEKVKASVKDSE
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaggcagacgtaatttctcagatcgctgagcaaaccggaattgataaggcagac
gttcaagaaactgttgaggcattcttccaggttgtgaagaactcaatggctaatggcgaa
aacatttacgttcgtggttttgggagtttcgtgaacaaaaaaagagcgcgtaaagtagct
cgtaatatttcacaaaacaccgctatcgttatcgatgagcattatgtaccggctttcaaa
ccatcaaaagtgtttgttgagaaggtaaaagcaagcgttaaagatagcgaataa
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