Pseudomonas putida S16: PPS_4360
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Entry
PPS_4360 CDS
T01570
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt00300
Lysine biosynthesis
ppt00550
Peptidoglycan biosynthesis
ppt01100
Metabolic pathways
ppt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPS_4360
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPS_4360
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PPS_4360
Enzymes [BR:
ppt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PPS_4360
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Gene cluster
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Motif
Pfam:
Mur_ligase_M
Mur_ligase
Mur_ligase_C
LpxK
Motif
Other DBs
NCBI-ProteinID:
AEJ14893
UniProt:
F8G584
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All DBs
Position
complement(4938752..4940107)
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AA seq
451 aa
AA seq
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MSLSQLTTALSGQQIGADATFTGVSIDSRSVGAGQLFVALAGPRFDGHDYLADVKAKGAV
AALVEREVADVDLPQLLVADCRLALGQLGALNRAAFDKPVVAITGSSGKTTVKEMLASIL
RTRGLVHATRGNLNNDLGAPLTLLEIAPEHSAAVIELGASRIGEIRYTVGLTRPQVVIIN
NAGTAHVGEFGGPEKIVEAKGEILEGLGEGGIAILNLDDKAFDIWKARAGAHKVFSFARN
NPKADFHASDIGRDARGCPSFKLHGAGDTVDVQLNVLGEHNVSNALAAAAAAHAVGLSLS
GIAAGLAAVQPVKGRTVAQIAPNGVRVIDDSYNANPTSMCAAIDILAGFSGRTVLVLGDI
GELGQWAEEGHRQVGDYARGKVDALYAVGSNMTHAVKAFGANGRHFATQAELIDAVGAEN
ASDTTILIKGSRSAAMENVVAALCGASGEKH
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcagccagctgaccacagcactgagtggtcaacaaatcggtgctgacgccacc
ttcaccggcgtcagcatcgacagccgcagtgttggcgccgggcaattgttcgtcgccctg
gctggcccgcgcttcgatggccacgactacctggccgatgtgaaggccaagggcgctgtc
gctgccctggtcgagcgtgaagtggccgatgtcgacctgccgcagctgctggtcgccgat
tgccgcctggccctcggccagcttggcgcgctgaaccgtgctgccttcgacaagccggtg
gtggccatcaccggttccagcggcaagaccacggtcaaggagatgctcgccagcatcctg
cgcacccgtggcctggtgcacgccacccgcggcaacctgaacaacgacctcggcgcgccg
ctgaccctgctggagatcgcccccgagcacagcgccgcggtgatcgagctgggcgcctcg
cgcattggcgagatccgctacaccgtcggcctgacccggccccaggtggtcatcatcaac
aacgccggcaccgcccacgttggcgagttcggcggcccggaaaagatcgtcgaagccaag
ggcgagattctcgaaggcctgggcgagggcggtatcgccatcctcaacctggacgacaag
gcctttgatatatggaaggcacgtgccggcgcgcacaaggtcttcagctttgcccgcaac
aatccaaaggccgatttccatgcctctgacatcggccgcgatgcccgtggttgcccgtcg
ttcaagctgcatggcgctggcgacacggtagacgtgcaactcaatgtgctcggtgagcac
aacgtcagcaatgccctggccgccgctgccgctgcccatgccgttggtctgagcctgagc
ggcatcgccgcaggcctggctgccgtgcaaccggtcaagggccgtaccgtggcgcagatt
gcgccgaacggcgtgcgggtgatcgacgacagttacaacgcaaatcccacctccatgtgc
gcggccattgatatactcgccggcttttccgggcgcaccgtcttggtgcttggggatatc
ggcgaactggggcaatgggcggaagaaggccaccgtcaggtgggtgactacgcgcgtggc
aaggtcgacgccctgtacgcagtgggttccaacatgacacacgcggtcaaggcgttcgga
gccaatggccgccatttcgctactcaagctgagctgatcgacgcggttggcgccgagaat
gccagcgacaccactatcttgatcaagggctcgcgcagcgctgcgatggaaaacgtcgtg
gcggcattgtgcggtgccagcggggagaaacattaa
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