Paenibacillus riograndensis: PRIO_3831
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Entry
PRIO_3831 CDS
T03849
Symbol
nfo3
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PRIO_3831 (nfo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_3831 (nfo3)
Enzymes [BR:
pri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PRIO_3831 (nfo3)
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PRIO_3831 (nfo3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CQR56234
UniProt:
A0A0E4HCA5
LinkDB
All DBs
Position
I:complement(4468145..4469008)
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AA seq
287 aa
AA seq
DB search
MTSSPKIGAHVSIRGGYGQAARFAWESGATCFQYFPKNPRSLRVKPLDRRDAASCAAFCR
EKGMVSIAHTPYPTNLAAASEGATPRPVMVASLLNDLEIAEACGSLGIVVHFGHFSGTEP
LQGYQNIIQCINDTLKGWDGQAKLLIENQAGNHGKEGMTLEELVKIRELSRYPEKIGFCL
DTCHAFSAGIWNPQHTGEFLQRGESLGYWPHLTAVHLNDSMYAFGLRKDRHAQIGKGCIG
DAGLRTLLTAKPFGRTAIALETGKGPDGTHRQEIAAVRKWYEAEVQL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtagtcccaaaatcggggcacatgtcagcattcgcggcggatacgggcaggct
gcccggttcgcctgggagagcggtgcgacatgttttcaatattttccaaagaatccgcgc
agtttgcgcgtgaagccgctcgaccggcgggatgccgccagttgtgccgctttttgccgg
gagaagggaatggtgtccattgcgcataccccttatcccactaatctggcagcggccagt
gaaggggcgacaccccggccggtaatggtggcatcgctgctcaacgacctggagattgcc
gaagcctgcggttcgctgggcattgtggttcattttggacatttctccgggaccgagcca
ttgcaaggctaccaaaatattatacaatgtataaatgatacgctgaaaggctgggacggg
caggccaagctcctgatagaaaaccaggccggcaatcacggcaaggaaggcatgacactg
gaagagctggtcaaaatccgtgagctcagccgttatccggagaaaatcgggttttgcctg
gacacctgccatgcgttctccgccggaatatggaacccgcagcatacgggggaattcctg
cagcgtggggaatcgcttggctactggccgcatcttacggccgtacatctgaacgattcc
atgtatgcgttcggcttgcgcaaggacaggcatgcccagatcggcaaaggctgtatcggt
gacgcgggcttgcggacgctgctgactgcgaaaccttttggccggacggctattgccttg
gagaccgggaagggacccgacggaacacaccggcaggaaattgccgcagtacgcaaatgg
tatgaagcagaggtgcagctatga
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