Phodopus roborovskii (desert hamster): 127221534
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Entry
127221534 CDS
T08852
Symbol
Spata5l1
Name
(RefSeq) ribosome biogenesis protein SPATA5L1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prob03009
]
127221534 (Spata5l1)
Enzymes [BR:
prob01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
127221534 (Spata5l1)
Ribosome biogenesis [BR:
prob03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
127221534 (Spata5l1)
BRITE hierarchy
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_14
AAA_33
TIP49
Rad17
bpMoxR
AAA_2
AAA_28
AAA_18
TsaE
AAA_3
nSTAND3
NTPase_1
Viral_helicase1
Zeta_toxin
RNA_helicase
AAA_17
AAA_7
IstB_IS21
NACHT
AAA_11
AAA_19
DUF815
AAA_30
Vps4_C
Motif
Other DBs
NCBI-GeneID:
127221534
NCBI-ProteinID:
XP_051039484
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MAPDSGLFPEAQILKLLPVDPRDRDTQRCRLGPTALRSLGARLGSPLKISLPAGGCCLCT
AWPRRDGADGFVQLDPQCASPGAAAATGRISLDSLQSVPCPPLRRLAVWPVLRQQAGAPS
PAAVLEVAHELLRNRPVSRGHVVAVPQGVPGPVAALHVVGGTPDPDPAGLVTPLTCITLS
DQPLPQVEPPGEVALGGLSETADSLRELLRLPLRYPLALAALGLAVPRGVLLAGPPGVGK
TQLVRAVAQEAGAELLAVSAPALQGARPGETEENVRRVFQRARELASRGPSLLFLDEVDA
LCPRRGGRGRAPESRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVV
IGTPTLKQRETILQVITSKMPISSHIDLGLLAEMTVGYVGADLAALCREAAMCALLKHEK
NQDCPKIEEIDFLDALKKIQPSSFRSSVGLMDIKPVGWEQIGGLEDVKLKLKQCVEWPLK
FPQEFARMGLKQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPYVGDSEKV
LSQVFRQARANTPALVFLDEIDSVLGSRSVGTLGCDARDRVLSVLLNELDGVGVRTVERR
GRKSDQQEYQEILNRNVMIVVATNRPDVLDDALLRPGRLDKMIYVPPPDQEGRLSILKIC
TNNMPIGSDVSLETLAAETCLFSGADLRNLCKEAALFALQENGLEATTVRQEHFRESLRT
VKPSLSRKGLALYENLFKKGLSNLEYN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggctccggactcggggctcttccctgaagcacagattttgaagctgctgccggtggat
ccccgggaccgggacacccagcgctgccgcctggggccgaccgccctccgcagcctgggc
gcgcgcctgggctcgccgctgaagatctcgttgcccgccggtggctgctgcctctgcaca
gcctggccccggcgcgacggggcggacggctttgtgcagctggacccgcagtgcgcgagc
cccggagccgcggcggcaacggggaggatcagtctggacagcttgcagtcggtgccctgt
ccgcccctgcggcgcctggcggtgtggccggtgctgcgacagcaggcgggagccccgagc
cccgctgcggtgctggaggtagcgcacgagctgcttcgcaaccggccggtgtctcgggga
cacgtggtggccgtcccgcagggcgttccgggcccggtagcggcgctgcacgtggtgggc
gggacaccggaccctgatcccgccgggttggtcacaccgctcacctgcatcacactcagc
gaccagccgctgccacaggtcgagcctcccggagaggtggcccttgggggcctgtcggag
acggccgactccctgcgggagctgctccgcctgccgctgcgctacccgctcgccctagcc
gcgcttgggctggcggtgccccgcggggtgctcctggcgggacccccgggagtaggcaag
acccagctggtgcgggccgtggcgcaggaggcgggtgcggagctgctggcggtgagcgcc
cctgcgcttcagggcgcccggcccggggagaccgaggagaacgtgcggcgcgtcttccag
cgcgctcgggagctggccagccgcgggcccagcctcctgttcctggacgaggtggatgcc
ctgtgtccccggagaggcggccgggggcgagcccccgagagccgagtagtggcccaggtg
ctgacgctgctggatggcatccacggggaccgagaggttgtagttgtgggagccaccaac
cggccagacgagttggacccagcgctgcgcaggcccgggaggtttgaccgagaggttgtc
attgggactcccactcttaaacaaagagagacaattctgcaagtgattacttcaaagatg
cccatctccagtcatattgatttaggtctcctggcagaaatgacagttggctatgttggt
gctgacctggcagcactctgtagggaggctgccatgtgtgcccttcttaagcacgagaag
aaccaagactgtcctaagatcgaagaaatagactttcttgatgctttgaaaaagattcag
ccctcatcatttcgaagttcagttggactgatggacatcaagcctgttggatgggagcag
atagggggacttgaagatgtaaagctgaagttaaaacagtgtgttgagtggcctctgaag
ttccctcaagaattcgctcggatgggtctgaaacagccaaagggccttctcctctatggt
ccccctggatgtgctaaaaccactctggtgagggccctggccacaagctgccactgctct
tttgtgtcagtgagcggagcagacctcttttcaccttatgttggagattcagaaaaagtc
ttatctcaggtatttcggcaagcaagagccaatactccagcgcttgtgtttttggatgag
attgactcagtcttggggtctcgctcagtcggcaccttgggatgtgatgctcgggaccga
gttctttcagttctgctgaatgaactcgatggtgtaggagttaggacggtagagagaaga
gggaggaaatcagaccaacaggaataccaagaaattcttaatcggaatgtcatgattgtt
gtggcaacaaataggcctgatgttttagatgatgccttgttacgacctggaagactggat
aagatgatctatgtcccccctcctgatcaagagggcaggctttctattttaaaaatctgt
acaaacaacatgccaatagggtctgatgtttcattagaaacactagcagcagaaacgtgt
ctcttctctggggctgatcttcgaaacctctgcaaagaagctgccttgtttgctctgcaa
gagaatggactggaagcaaccacagtgagacaggagcacttcagggaatcccttaggact
gtgaagccatccttaagtcggaaaggcttggctttatacgaaaacttatttaagaaagga
ctctctaacttagaatataattaa
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