Pyrgilauda ruficollis (rufous-necked snowfinch): 121362051
Help
Entry
121362051 CDS
T07608
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121362051 (PTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
121362051
NCBI-ProteinID:
XP_041339183
LinkDB
All DBs
Position
Unknown
AA seq
1350 aa
AA seq
DB search
MPAEPPRAAPPPLRAARRKPLPEGRAVGQRTPLWLRARFQALLFALGCRIQRHCGKVLFV
GLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKK
DGDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLF
PCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLMEELGQFTSLEGFKELLDKA
EVGQAYMERPCLDPRDPQCPSSAPNKQSQQSPDIPAELSGGCHGFSRKFMRWQQELILGG
TTKDSQGKLLRAEALQTMFLLMSPRQLYEHFKDDYEIHDISWSEEKAGAILEAWQRKFVE
LAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLLMLAYACVTMLRWDCSKS
QGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTET
SQHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAM
VLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQELADANDNHACHPSPYGHP
GMATSTQITTTVQAFTRCDPSGHHIVTVLPPTSQVCTSPAILLPHTDPLGSQVFAPSSST
RDLLSQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRTKVVVVVLFLALLGLSLY
GTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKGGFHYPGAQAALLSLHQA
FSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRITHDSYRNGSEDGALAYK
LLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWASNDPLGFAASQANFYPPP
PEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVEAIESVRAICQEAAQRHG
VLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCAMLLLNPWTAGIIVSILAMIAV
ELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAAGSRNVRSAAALEHTFAP
VMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGLVLLPVLLSVIGPPPEAS
LVDSGPCLPPPESIPPCLGPGGLYVRRAPAWPATFPEPSDTESVGPGSPRGPFVVPPAPA
HILLEAGKDPSFPRITVLKPYKDSLEVQGKKEASGPQPAAPLPFGEPCTSLPRDPPQPGP
AGTRPAPPAALPTYSTHLQGPAGSYTTVTATASVTVALHPTLPGSYPSFSPEGFTSSERD
CLDEPSTSGTAVPDTFEMQNMGHHGAGAWR
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgagcccccccgcgccgcgccgccgccgctccgcgccgcccgccgcaagccg
ctgcccgagggcagggccgtgggccagaggaccccgctgtggctgcgggcccgctttcag
gcgctgctcttcgccctgggttgccggatccagcggcactgcgggaaggtgctcttcgtg
gggctgctggtgttcggggcgctggccgtgggactacgggtggcctccatcgagaccgac
atcgagcacctctgggtggaagcgggcagccgggtgagccaggagctgcgctacaccaag
gagaagttgggcgaggagtccgtctacacctcccagatgttgatccagacgccgaagaag
gatggtgataacatcctgacacaggaggccctgcagctccacctcgaggcggccttggcc
gccagcaaggttcaagtctcactgtacggaaaatcgtgggatttgaacaagatctgctac
aagtcgggtgtccccatcattgagaatggcatgatcgagaggatgatagagaagctgttc
ccctgtgtgatcctgacaccattggactgcttctgggaaggctccaagctgcaaggaggc
tcagcctatctcccgggccgcccagacatccagtggagcaacctggatcctctgcagctg
atggaggagctggggcagttcacatccctggaaggcttcaaagagctgctagacaaggca
gaggtgggacaggcttacatggagcggccctgcctggacccccgggacccccaatgtccc
tccagtgcccccaacaagcagagccagcagagccccgacatcccggccgaactctcgggg
ggctgccacggcttctccaggaagttcatgcgctggcagcaggagctgattttaggcggc
acgaccaaagactcccagggcaagctgctacgcgccgaggccctgcagaccatgttcctc
ctcatgagcccccggcagctctatgagcacttcaaggatgactacgagatccatgatatc
agctggagcgaggagaaggcaggagccatcctggaggcctggcagaggaaattcgtggag
ttggcacaggactccatccctcccaacgccacgcagagtgtccatgccttctccaccacc
acgctcaatgacatcatgaagtccttctctgacgtcagcgtcatccgggtggctgggggc
tacctcctcatgctggcctatgcctgtgtcaccatgctgcggtgggactgctccaagtcc
cagggggctgtgggcctggctggggtcctgcttgtggctctctccgtcgcctctggcctg
gggctttgctcactgctgggcatctccttcaatgcagccaccacccaggtcctgcccttc
ctggccctcggcattggggtggatgacatgttcctcttggctcacgccttcaccgagacg
agccagcacatccccttcaaggagcggacgggtgagtgtctgaagcgcacggggaccagc
gtggctctcacctctgtcagcaacatgatcgccttcttcatggcagccctggtgcccatc
cctgccctgcgcgccttctccctccaggctgcagtggttgttgtgttcaacttcgccatg
gtgctcttcgttttccctgctatcctgagcctggacctgcaccgccgggagaaacgccgg
ctcgacatcctctgctgcttctacagcccttgctcctcaagggtcatccagatccagccc
caagagcttgctgacgccaacgacaaccatgcctgccatccatctccttatgggcacccc
ggcatggccaccagcacccagatcaccaccactgtgcaagccttcacccggtgtgacccc
tcgggccaccacattgtcaccgtcctgccacccacctcccaggtgtgcacctcacctgcc
atcctcctgccccacactgatcccttgggctcgcaggtcttcgctccatccagctccacc
cgggatctgctgtcccagctggatgaggccaagggtggccgggagtgtgtccccctgccc
ttctgccgctggagcctcgctgatttcgcccgggagaagtacgccccactccttctgcga
acccggaccaaggtggtagtggtggtgctgttcctggcactgctaggactgagcctctat
ggcaccaccatggtacatgatggcctctacctgacggacatcgtgccacgggacaccaag
gcacacgccttcatctcggcccagttcaagtacttctccttctacaacatgttcattgtc
actaagggtggcttccactacccgggtgcccaggctgccctgctgagtctgcaccaggcc
ttcagcaccgtcaagtacgtggtgcgggagggcaaccgcgacctgcctaaaatgtggctc
cattacttccaggactggctgagagggctccaggccaccttcgacagggactggcaggcc
gggcgcatcacccatgacagctaccgcaatggctccgaggatggggcactggcctacaag
ctcctcatccagactggcaacaagaaggagcccttcaatttcaaccagctgaccacgcgg
cgactggtggacgagaatggcatcatcccccccgacaccttctacatctgcctgacggtg
tgggccagcaacgaccccctgggctttgctgcctcccaggccaacttctaccccccaccc
cccgagtggattcatgacaagtacgacaccacgggcgagaacctgcgaatcccagcagcc
cagccactggagttcgcccagttccctttctacctgagcgggctgcgtcgcacgtccgac
ttcgtggaggcgattgagagcgtacgggccatctgccaggaggccgcccagcgccacggc
gtgctgagctaccccagcggctaccccttcctcttctgggagcagtacatcggcctgcgg
cactggttcctgctggccatcagcatcctgctggcctgcaccttcctcgtctgcgccatg
ctgctgctcaacccctggaccgccggcatcatcgtctccatcctggccatgattgctgtg
gaattgtttggcatcatggggctgatgggcatcaagctgagcgccatccctgtggtcatc
ctcattgcctcggtgggcatcggtgtggagtttactgtccacgtggccctgggcttcctg
acggctgcggggagcaggaacgtgcgctcagccgcagcactggagcacacttttgcacct
gtgatggatggtgctgtctccaccctcctgggtgtcctcatgctggctggctccgagttc
gatttcatcatgaggtacttctttgcggtgctgaccatcctgacgctgctggggctgctc
aacgggctggtgctgctgcctgtgctgctctctgtcatcgggccacctcctgaggcatcc
ctggtggatagtggcccctgcctacccccaccagagtcaatacccccatgtctgggccct
gggggactgtacgtccggcgcgctccagcctggcccgccaccttccctgagccttctgac
acggagagcgtggggccaggcagcccacggggacccttcgttgtgccccctgccccagca
cacatcctactggaggctggcaaggaccccagcttcccccgcatcactgtgctgaagccc
tacaaggacagcctggaggttcaggggaagaaagaggcttctggccctcagcctgcagcc
cccctgccctttggggagccgtgcacctcgctgccccgagatcccccgcagcccggccca
gcgggcacccggccagccccccccgcagccctgcccacctacagcacccacctgcagggt
cctgccggcagctacaccaccgtcacggccaccgcatcagtgacagtggctctgcacccc
acactgcctggctcctaccccagcttcagccctgagggcttcaccagcagcgagcgggac
tgcctggacgagcccagcaccagcggcaccgctgtgcccgacacctttgagatgcagaac
atgggacaccacggggcaggtgcctggcgctag
DBGET
integrated database retrieval system
