Phocoena sinus (vaquita): 116741590
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Entry
116741590 CDS
T07759
Symbol
PDZD7
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 7
KO
K21882
PDZ domain-containing protein 7
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116741590 (PDZD7)
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116741590 (PDZD7)
Cilium and associated proteins [BR:
psiu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
116741590 (PDZD7)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
116741590 (PDZD7)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
116741590
NCBI-ProteinID:
XP_032464284
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All DBs
Position
16:complement(57612984..57632033)
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AA seq
984 aa
AA seq
DB search
MAHGFPVGFDPVGLRDLSSGSLSSLSSRGHLGSESGSATRYLLRKQRRLLNGPLRGIRAS
SPMGRVILINSPIEANSDESDIIHAVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEKGSS
AERAGLCVGDKITEVNGLSLESTTMGSAVKVLTGSSCLHMMVRRMGRVPGIKFSKEKTTW
VDVVNRRLVVEKCSSTPSDSGSEDGARRIVHLYTTSDDFCLGFNIRGGKEFGLGIYVSKV
DHGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHIMLTIKETGRYPAYKEMV
SEYCWLDRLSNGVLQQLSPASESSSSASSFASSAPYSSADGWSSLPSDHLDVCLGPEESG
SWGPGRGRADTAMQTEPDTGGHVETWCSVRPTVILRDTAIRSDGPRPAPRLDSALSESPK
TALLLALSQPRPPITRSQSHLTLWEEKKQRRKEKSGSPGEKGALQRSKTLMNLFFKGGRQ
GRLAGDGRREVWTLDSGSTARSRPHPDLEKAGGAGSVPKFVTWRLRRGNACIPLPSLVYD
RERGRTLLSARSRSPSSQLPNVDERVQAWESRRPLIQDLARRLLTDDEVLAVTRHCSRYV
HEGGVEDLVRPLLAILDRPAKLLLLRDIRGVVAPTDLGRFDSMVMPVELEAFEALKSQAV
WPPALRPARQDTPPKRHLITPVPDSRGGFYLLPVNGFSEEEDDGELRERLGGLQVSLGAS
ASRHPHKGIPPLQDVPVDAFISRRSACTPPPQPPPVAPRPPRPNWLLTEPLTLEGPRQSR
SQGPSQSRSRSRGRGKSPGRRRSPSPAPIPTPSTASGRYHKPRKARPPLPRPTDRQVAKA
GGSQGPSENGTGGTAEEAATKVPSGELRTVTLSKMKQSLGISISGGIESKVQPMVKIEKI
FPGGAAFLSGALQAGFELVAVDGESLEQVTHQRAVDTIRRAYRNKAREPMELVVRVPRPD
PLPLPSDSSALTEQQLPGDHSPAR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatggcttcccagtgggcttcgacccagtgggcctcagagacctaagctctggc
tctctgagctccctctcctcccgaggccacctgggcagcgagtcaggctctgcaacccga
tacctgctgagaaagcaacggcggctgctgaatgggcccctccgcggaatccgagcctca
tcgcccatgggccgtgtcatcctcatcaactctcccatcgaagccaacagcgatgaaagt
gacatcatccatgcagttcgagtggagaagagtccagctgggaggctggggttcagtgtg
cggggcggctctgagcacggcctgggcatcttcgtcagcaaagtggagaaggggagcagt
gcagagcgggctggtctgtgcgtgggtgataagatcaccgaggtgaatgggctgagcctg
gagagcaccacgatgggcagtgctgtgaaggtgctgacgggcagcagctgcctgcacatg
atggtgaggcgcatgggccgcgtaccaggcatcaagttctccaaggagaagaccacgtgg
gtggatgtggtcaatcggcggctggtggtggaaaagtgcagctcaacgccctctgacagt
ggctcagaggacggcgcacggcgcatcgtccatctctacacaacctctgatgacttctgc
ctgggcttcaacatccgtgggggcaaggagtttggcctgggcatctatgtgtccaaagtg
gaccacggtggactggccgaggagaacggcatcaaggtgggggaccaggtcctggcggcc
aatggtgtcaggttcgacgacatcagccacagccaagccgtggaggtgctgaagggccaa
acacacatcatgttgaccatcaaggagactggccggtatcctgcctacaaggagatggtt
tctgaatactgttggctggatcgattgagcaacggggtgctgcagcagctgtcccccgcc
tcggagagcagctccagcgcctcctcgttcgcctccagtgccccctacagctcggccgat
ggctggagctccctgccctcggaccacctggatgtctgcctggggcctgaggagtcgggc
agctggggaccaggccgggggcgggcagacacggccatgcagacggagccagacacgggg
ggccacgtggagacctggtgtagtgtgcggcccacagtcatcctcagggacacggccatc
cgctccgacggcccccgccctgccccccgccttgactctgcactctctgagtcccccaaa
actgctctgctcctggccctcagccaaccccggccccccatcacccgctcccagagccac
ctaaccttgtgggaggagaagaaacagcggaggaaggagaagtcggggtcccctggggag
aagggggccctgcagcgctccaagaccctgatgaacctcttcttcaagggagggcggcag
ggccggctggcaggggacgggcgcagagaggtctggacgctggacagtgggagcacagcc
aggtcccgcccccacccggacctggagaaagcagggggagcgggatccgtgccgaagttt
gtcacctggaggctgagacgtggtaatgcgtgcatccctctaccgagcctggtttacgac
cgggagagaggccggactctgctctctgccaggtccaggagcccctccagccagctgccc
aacgtggatgagagggtgcaggcctgggagagccgaaggcccctgattcaggacctggcc
cggaggctgctgactgatgacgaggtgcttgctgtcacccgccactgttcccggtacgtg
catgagggcggcgtggaagacctggtgaggcccctgctggccattctggacaggcctgcg
aagctgctgctgctgagggacatcaggggtgtggtggcccccacagacctgggtcgcttt
gacagcatggtgatgcctgtggagctggaggcttttgaggccctcaagagccaggcagtt
tggcctcctgccttgcgaccagcccggcaggacacaccgcccaagcgtcacctcatcact
cctgtgcctgacagtcgtggaggcttctacctacttcctgtgaacggcttctcagaggag
gaagatgatggggagctgagggagcgtctggggggcctccaggtctccctgggtgcctct
gcctcccgccaccctcataaagggatcccccctctccaggatgtgccagtagatgccttc
atctcacgcagaagcgcctgcacaccccctccccagccaccccctgtggctccccggccc
ccgaggcctaactggctgctgacagaacccttgaccctagagggccctcggcagagccgg
agccagggcccaagccagagccgcagccgcagccggggcagaggcaagtcccccggacgc
aggcgttccccatccccggcacctatccccactcccagcacagccagcgggcgctaccac
aagcctcggaaggccaggcctcctctgccacgacctacggataggcaggtggccaaggca
gggggcagtcaagggccctctgagaacggaactggtgggacagccgaggaggcagccacg
aaggtccccagtggggagctgaggaccgtcacactatccaagatgaagcagtccttgggc
atcagcatttctgggggcattgagtccaaggtgcagcccatggtgaagatagaaaagatc
ttccctgggggcgccgccttcctcagtggggcccttcaggctggctttgagcttgtggcc
gtggatggagagagcctggagcaggtgacccaccagcgggcagtagacaccatccgccgg
gcttatcgaaacaaggctcgggagcccatggagcttgtggtcagggtccccaggcccgac
ccactgcccttaccctctgactcatcagccctcactgaacagcagcttcctggtgaccat
tcccctgcccgctga
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