Phocoena sinus (vaquita): 116747448
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Entry
116747448 CDS
T07759
Symbol
CLCN5
Name
(RefSeq) H(+)/Cl(-) exchange transporter 5 isoform X1
KO
K05012
chloride channel 3/4/5
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
116747448 (CLCN5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116747448 (CLCN5)
Ion channels [BR:
psiu04040
]
Chloride channels
Chloride channel (CLC)
116747448 (CLCN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
116747448
NCBI-ProteinID:
XP_032475527
Ensembl:
ENSPSNG00000022408
LinkDB
All DBs
Position
X:44045556..44213178
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AA seq
816 aa
AA seq
DB search
MAMWQGAMDNRGFQQGSFNSFQSSSSDEDLMDIPGTAMDFSMRDDVPPLDGEIEEDKSYN
GGGIGSSNRMMDFLEEPIPGVGTYDDFNTIDWVREKSRDRDRHREITNKSKESTWALIHS
VSDAFSGWLLMLLIGLLSGSLAGLIDISAHWMTDLKEGICTGGIWFNHEHCCWNSQHVTF
EDRDRCPEWNSWSQLIISTNEGAFAYIVNYFMYVLWALLFAFLAVSLVKVFAPYACGSGI
PEIKTILSGFIIRGYLGKWTLIIKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHCFN
KYRKNEAKRREVLSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAF
TLRSINPFGNSRLVLFYVEFHTPWHLFELVPFILLGIFGGLWGALFIRTNIAWCRKRKTT
QLGKYPVIEVLVMTAITAILAFPNEYTRMSTSELISELFNDCGLLDSSKLCDYENRFNTS
KAGELPDRPAGVGVYSAMWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLG
VGMEQLAYYHHDWAIFNSWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTG
GLEYIVPLMAAAMTSKWVADALGREGIYDAHIRLNGYPFLEAKEEFAHKTLAMDVMKPRR
NDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKK
QDGVVSTSVIYFTEHSPPVPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQ
CLVTHNGRLLGIITKKDVLKHIAQMANQDPDSILFN
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtggcagggagccatggataacagaggctttcagcaggggagtttcaatagc
ttccagagcagctccagtgatgaggacttgatggacataccagggacagctatggatttc
tccatgagagatgatgttcctcccttagatggagaaatagaagaggacaagtcatacaat
ggtggaggaataggttcttcaaataggatgatggacttcttggaggagccaatccctggt
gtggggacctatgatgatttcaatacaattgattgggtgagggagaagtctcgagaccgg
gataggcaccgagagattaccaataaaagcaaggagtcaacatgggccttaattcacagt
gtgagcgatgctttttctggctggttgttgatgctacttattgggcttttatcaggttcc
ctagctggcttgatagacatctctgctcactggatgacagacttaaaagaaggtatatgc
acagggggaatctggtttaaccatgaacactgttgctggaactcccagcacgtcaccttt
gaagacagagacagatgcccagagtggaatagctggtcccagcttatcatcagcacgaat
gagggagcctttgcttacatagtcaattacttcatgtatgtcctctgggctctcctattt
gccttccttgccgtatctcttgtcaaggtgttcgcaccgtacgcctgtggctccggaatc
cctgagataaaaactatcttgagtggtttcattattaggggctatttgggtaagtggacc
ctgattatcaaaaccataacactggtgctggcagtgtcatctggcctgagcttgggcaaa
gagggccccctagtgcacgtggcttgctgctgtgggaacatcctgtgccactgcttcaac
aaatacaggaagaatgaagccaaacgcagagaggtcttgtcagctgcagctgcagccggt
gtatctgtagccttcggggcacctattggcggagtattattcagcctggaagaggtcagc
tactactttcccctcaaaacactgtggcgttcgttttttgctgctttagtggcagcattc
accctacgctccatcaatccgtttgggaacagccgcctggttctattttatgtggagttt
cacaccccatggcatctctttgagctcgtgcccttcattctgttgggcatatttggtggc
ctgtggggagctctgtttatccgcaccaatattgcctggtgtcggaagcgtaagaccacc
cagttgggcaagtatcctgtcatagaggtactcgtcatgacggccatcactgccatcctg
gctttccccaatgagtacacccgtatgagcacaagtgagctcatttccgagctgttcaat
gactgtggccttctggactcctctaagctctgtgattatgagaaccgtttcaacacaagc
aaggcgggtgagctgcccgacagaccagctggtgtgggagtctacagcgcaatgtggcag
ctggccttgacactcatactgaaaattgtcatcactatattcacttttggcatgaagatc
ccttccggcctctttatccctagcatggctgttggtgctatagcgggtcggcttttggga
gtagggatggaacagctggcttattaccaccatgactgggccatcttcaatagctggtgc
agtcaaggagcggattgtatcacccctggcctttatgcaatggttggggctgcagcctgc
ttgggcggggtgactcggatgactgtttctcttgttgtcataatgtttgaactaactggt
ggcttggaatacattgtgcctctgatggccgcagccatgacaagcaagtgggtggcagat
gctcttgggcgggagggcatctatgatgcccacatccgtctcaacggatacccctttctt
gaagccaaagaagagtttgctcacaagaccctggcaatggatgtgatgaaaccccggaga
aatgatcctttgttgactgtccttactcaggacagtatgaccgtggaagacgtagagacc
ataatcagtgaaaccacttacagtggcttcccagttgtggtgtcccgggagtcccaaaga
cttgtgggttttgtcctccgaagagacctcattatttcaattgaaaatgctcgaaaaaaa
caggatggagttgtgagcacttctgtcatttatttcaccgagcattctcctccagtgcca
ccatacaccccacctaccctcaagcttcggaacatcctggatctcagccccttcactgtg
actgaccttacacccatggagatcgtggtagatatcttccgcaagctgggactgcggcag
tgcctggttacacacaatgggcgattgcttggaatcattaccaaaaaggatgtgctaaag
catatagcacagatggcgaaccaagatcctgattccattctcttcaactag
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integrated database retrieval system
