Puntigrus tetrazona (Sumatra barb): 122326448
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Entry
122326448 CDS
T08985
Symbol
ptch2
Name
(RefSeq) protein patched homolog 1
KO
K11101
patched 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122326448 (ptch2)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
122326448
NCBI-ProteinID:
XP_043077272
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All DBs
Position
2:complement(15769765..15796297)
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AA seq
1448 aa
AA seq
DB search
MASDPRDPGPAGGVFGDLPPSYTRSPPPVNSDLLRRPSYCHAAFALKQISKGKAVGQKAP
LWIRARFQAFLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETDIEKLWVEAGSRV
SKELRYTKEKQGEESVFTSQMLIQTPKQEGNNILTQEALLLHLEAALSASKVQVSLYGKS
WDLNKICFKSGVPIIENVMIERMIDKLFPCMIVTPLDCFWEGSKLQGGSAYLPGMPDIQW
MNLDPLKLMEELSQFTSLEGFREMLDKAQVGHAYMNRPCLDPNDTDCPHSAPNNDPRQVP
DIAAELQGGCHGFSKKFMHWQEELILGERVKDSQNALQSAEALQTMFLLMSPKQLYEHFK
DDYEIHDINWNEDKATAILESWQRKFVEVVHGSIPQNSSSNVYAFSTTTLNDIMKSFSDV
SVIRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNA
ATTQVLPFLALGIGVDDMFLLAHSFTETRSNIPFKERTGDCLRRTGTSVALTSINNMIAF
FMAALVPIPALRAFSLQAAIVVVFNFAMVLLIFPAILSLDLHRREDKRLDILCCFYSPCS
SRVIQIQPQEFSDANDNLQHAPATPTYTGSTITTSTHITTTVQAFTQCDAAGQHIVTILP
PTSQISTSPPSMVLSTPTPTADPYGSQLFTTSSSTRDLLAQVEEPKEGRECVPLPFCRWN
LSNFAREKYAPLLLKPETKTVVVVVFVALLSLSLYGTTMVHDGLYLTDIVPRDTKEYDFI
TAQFKYFSFYNMYLVTMDGFDYARSQRQLLQLHNAFNSVKYVVKDSDHKLPRMWLHYFQD
WLKGLQATFDADWEAGRITYDSYRNGTEDGALAYKLLIQTGSKKEPFNYSQLTSRRLVDE
DGLIPPEVFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYDTTGENLRIPAAEPLEF
AQFPFYLNGLRQASDFIEAIESVRTVCEEFMRQGIQNYPNGYPFLFWEQYIGLRHWFLLS
ISVVLACTFLVCAILLLNPWTAGVIVFILAMMTVELFGIMGLIGIKLSAIPVVILIASVG
IGVEFTVHIALGFLTAIGDRNTRSAVAMEHMFAPVIDGAISTLLGVLMLAGSEFDFIMRY
FFAVLAILTLLGILNGLVLLPVLLSLIGPPAEVVPANNGNHLQSPSPEPMPPPMNHHGYY
AGHIPKGPRHAFSETSDSEYYSETTTTSGIGEEEYKYCDRSTYITSPAQGPTSHILLEAS
KNPSFPKLTVVKPFNESSKGQNSESKQNAVNSVSSQITRWDNKQEYQGQRRQHLPSDRTH
CPRRTTQCGQGPQPGRGQQQNRTTAPAHSPGALQSPNNAITMVTATASVTVALHPSLPGS
YQGYMHEGFEDNESDSFDDSKRTSQMYGKATHYKRNSLELQDLESTEKNQHQANQALGGA
WIQAAKDC
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggatcccagagacccgggaccggccggtggtgtttttggagatttaccccca
agttacacgcgctctccgccgcctgtgaactcagatcttctccggagacccagttactgc
cacgccgcttttgcgttaaaacagatttctaaggggaaagctgtgggacagaaagcacca
ctgtggattcgggcgaggttccaggcttttctcttttctctgggctgtcacatccagcga
cactgtggaaaagtccttttcattggacttcttgtgttcggagccctgtctgttggtttg
cgggtcgctgccattgaaacggacattgaaaaactatgggtggaagctggcagtcgggtg
agcaaggagctacgctacacaaaagagaagcagggagaggagtcagtgttcacctcacag
atgctcatacagacacccaaacaggaaggaaacaatattcttacccaggaggctttgctg
ctccacctggaggctgctttgtcagccagcaaagttcaagtgtctctttatggaaaatct
tgggatcttaataaaatttgcttcaaatccggagtcccaattatagaaaatgtcatgatt
gagaggatgattgacaagcttttcccctgtatgatcgtgactcctttggactgcttttgg
gaaggctctaagctgcagggaggctctgcctatttaccgggaatgcctgatattcagtgg
atgaatctagaccccctcaagctaatggaggagttgagccagtttacatctctagagggt
tttcgagagatgctagataaggctcaggtgggccatgcctatatgaaccgcccatgcttg
gatcccaatgacacagattgccctcacagtgcccctaataatgacccacggcaggtccct
gacattgctgctgaacttcagggtggttgccatggtttctccaagaagttcatgcactgg
caggaggagttgatcctgggtgaaagagtaaaggactcccagaatgccttgcagagtgcg
gaggctcttcagaccatgttcctccttatgagtcccaaacagctctatgagcactttaaa
gatgactatgagatccatgacatcaactggaacgaggacaaggccactgccatcttggag
tcctggcagaggaaatttgttgaggttgtccatgggagcattcctcagaactcttcctcc
aacgtttatgccttctctaccactactcttaatgacataatgaagtccttctcggacgtc
agtgtaatcagggtggcaggtggttatctgctcatgctggcatacgcatgcgtgaccatg
ctgcgctgggactgtgctaagtctcagggtgctgtagggctagccggagtgcttctagtt
gctctctctgtggctgcaggacttggtctgtgctcgctgctggggctgtccttcaatgct
gccaccacacaggtgctgccattcctggccctgggcattggagtggatgacatgtttttg
ctagctcattccttcactgagaccagatccaacatcccgttcaaggagaggacaggcgac
tgcctaagaagaactggcaccagtgtggctctcacctccatcaataacatgattgctttt
ttcatggctgccctagtgcctattcctgcactccgggccttctcacttcaggcagctatt
gtggttgtctttaactttgccatggttctgctgatcttccctgccattctgagcttggac
ctgcaccggagggaagacaaaagactggacatcctgtgctgtttctacagcccctgttca
tcccgggtgatccagatccagcctcaggagttctcagatgctaacgacaacctccagcat
gctccggccacccccacctacactggctccactataaccaccagcacccacatcaccact
acggtgcaggcattcacccagtgtgatgcagctggtcagcatattgtcaccattctgcca
cccacttcccagatctccacaagtcctccatccatggtcttgtccacacccactccgaca
gctgacccttatggctcccagctgttcaccacctccagctccacccgagaccttctagcc
caggtggaggagcctaaagagggccgcgagtgtgtgcctttgccgttctgccgctggaat
ctgtcaaactttgcacgggaaaagtatgcccctctgttgttaaagccagaaactaagact
gtagtggttgtcgtttttgtggctcttcttagcctcagcctctatggtaccacaatggtc
catgatggactctacttgactgatattgtccccagagacacaaaggagtatgacttcatc
actgcccagtttaaatacttctctttctataacatgtacctggttaccatggacggtttt
gactatgcccgctctcagagacagcttcttcagcttcacaatgccttcaactctgtaaaa
tatgtagttaaggatagcgatcacaaacttcccagaatgtggctgcactacttccaggac
tggctcaaaggtctgcaggctacatttgatgctgactgggaagctggcagaatcacctat
gacagctatcgcaatggcacagaggatggagcgctggcttacaagctcctcattcaaact
ggctctaaaaaagaaccttttaactacagccagctcacttcccgtcgcctggtagacgag
gatggtctcattccaccagaggttttttacatctacctgacagtatgggtcagtaatgat
ccattaggatatgctgcctcccaagccaacttttacccccatcctcgggagtggatccat
gataagtacgacaccactggggaaaaccttcgcatccctgcggcagaacctctagagttc
gctcagtttcctttttacctaaatggcctcagacaagcttcagacttcattgaagccatt
gagagtgtgcgcacagtttgcgaggaatttatgcgtcagggaattcagaactatcccaat
ggctacccctttttgttctgggaacagtacattggtctgcgtcactggttcttgctgtcc
atcagcgtagtccttgcctgcactttcctggtgtgcgccatcctcctgctcaacccctgg
accgcaggcgtcattgtttttattttggccatgatgacagtggaactttttggcatcatg
ggcctaattggtatcaaactgagtgccattcctgtcgtcatccttatagcctccgttggt
attggagtggagtttactgtgcatattgcactgggtttcctgactgccattggggacagg
aacactcgttcagccgtggctatggagcatatgttcgctcctgtgattgacggcgccatc
tctactctgctgggagtgctcatgcttgccggctcagagtttgacttcatcatgagatac
ttctttgcagttttggccatactgacactactggggatccttaatggtttggtgctactt
ccagtactgctttcactcataggccccccagctgaggttgtacccgctaataatggcaat
catttgcaaagtccctctcctgagcccatgcctcctcctatgaaccaccatgggtattat
gctgggcacatccccaagggaccacgtcacgcattctctgagacctctgactctgaatac
tattctgaaaccacaaccacctctggcatcggcgaggaggagtataagtactgtgacagg
agcacatacatcacgtctccagctcaaggaccaacctctcatatcctgcttgaagccagc
aagaaccccagtttccctaagctcacggtggtgaaaccttttaatgaaagctctaaagga
cagaacagtgagtccaagcagaatgcagtcaactcggtcagttcacagatcacacggtgg
gacaacaaacaggagtaccaagggcagagaagacaacatttacctagcgacaggacccac
tgtcctcggaggactactcagtgtggccaagggccacaaccaggcagagggcagcagcaa
aacaggactacagccccagctcacagccctggggcattgcagagccctaacaatgcaatc
accatggttacagcaacagcctctgttacagtggcattgcaccccagtttgccggggtcg
taccagggttacatgcatgaggggtttgaggataacgagtcagactcttttgacgactct
aagaggacttctcaaatgtatgggaaagctacacattataagaggaactctttggaactt
caagacctggaatccacagagaaaaaccagcatcaagctaaccaggcgctaggtggtgca
tggatccaagcagccaaagattgctag
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