Pseudomonas trivialis: AA957_20230
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Entry
AA957_20230 CDS
T04006
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ptv
Pseudomonas trivialis
Pathway
ptv01501
beta-Lactam resistance
ptv02020
Two-component system
Module
ptv_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AA957_20230
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AA957_20230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptv02000
]
AA957_20230
01504 Antimicrobial resistance genes [BR:
ptv01504
]
AA957_20230
Transporters [BR:
ptv02000
]
Other transporters
Pores ion channels [TC:
1
]
AA957_20230
Antimicrobial resistance genes [BR:
ptv01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
AA957_20230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AKS08354
UniProt:
A0A0H5AB94
LinkDB
All DBs
Position
complement(4478791..4480074)
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AA seq
427 aa
AA seq
DB search
MRVMKWSMIALAVSAAGTSQLATASSQDDSKGFVEDSTFSINTRALYFSRDFRNNPSGPG
TKSRAEETGLGFNALYESGFTQGTIGVGVDVIGLLGVKLDSGKGRAGTGLFPTGSDGRSQ
DDYSKGGGAVKFRISDTVLKIGDQYTTAPVFASDDSRLLPELPQGISITSNEIKGLKLEG
GHFTSSVAQNQTYHDSLGLTKTDFVGGVYSFTPEFTGSLYYAKTEDYFRKYYSNLNWTHA
LSDDQSFALDFNIYDTKSEGAGLQRAEKDGTTKLDNRAFSLQGAYTIGAHTFTLAAQKVT
GDGDYGYGVDGGGTVFLANSIARSDFNAEGEKSYQARYDINMATFGIPGLSFMTRYVTGS
GANTGTTSNGKEWERDIEAKYVVQSGPAKNLSLRLRQATYRSGDGVYYGSPSIDELRLIA
NYPLNIL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggctgtctcggcagcaggcacctcacag
ttggcaacggcgtcctctcaggacgattccaagggctttgttgaagacagtactttcagc
attaatacccgcgctctgtatttcagccgcgacttccgtaacaacccgtcgggcccgggc
acgaagagccgtgcagaagaaaccggcctgggcttcaacgccctgtacgaatcgggcttc
acccaaggcaccatcggcgtcggcgtcgacgtgatcggcctgttgggcgtcaagctcgac
agcggcaagggtcgcgccggtaccggtctgttcccaaccggttccgacggtcgttcgcag
gatgactactccaaaggcggcggtgccgttaagttccgtatctccgatacggtcctgaaa
atcggtgaccagtacaccacggctcctgtgttcgcttctgacgacagccgcttgctgcca
gagctgccacaaggtatctcgatcaccagtaacgagatcaagggcctgaagctggaaggc
ggtcacttcacctccagcgtcgcgcagaaccagacctaccatgacagtctgggcctgacc
aaaaccgactttgtcggtggtgtgtactcctttacgcctgagttcaccggtagcctgtac
tacgcgaagaccgaagattacttccgtaagtactacagcaacctgaactggacccacgca
ctgagcgacgatcagtccttcgccctcgacttcaacatctacgataccaagagcgaaggt
gccggcctgcaacgcgcagagaaagatggcaccaccaagcttgataaccgtgctttcagc
ttgcagggcgcttacaccatcggcgctcataccttcaccctggcagcccagaaagtcacc
ggtgacggcgactatggctacggcgtagacggcggcggcacagtgttcctggccaactcc
atcgcccgctccgacttcaacgccgaaggcgagaagtcctaccaggcccgttacgacatc
aacatggcgacctttggcattcctggtcttagcttcatgactcgttatgtcaccggtagc
ggcgccaacaccggcaccacgtcgaacggtaaagaatgggaacgtgatatcgaagccaag
tacgtggtacagagtggcccagcgaaaaacctgagcttgcgtctgcgccaagccacttat
cgctccggcgatggcgtttactacggctcgccttcgatcgacgaactgcgtctgatcgcg
aactacccgctgaacatcttgtaa
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