Panicum virgatum (switchgrass): 120702548
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Entry
120702548 CDS
T07260
Name
(RefSeq) leucine carboxyl methyltransferase 1 homolog isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120702548
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
120702548
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
120702548
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120702548
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
PilJ
MptE-like
Motif
Other DBs
NCBI-GeneID:
120702548
NCBI-ProteinID:
XP_039842340
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Position
4K:complement(3106633..3116136)
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AA seq
347 aa
AA seq
DB search
MEASAAEGGGGSAAARSSPAAVQATNDDAAASKLSCVNKGYMKDDYVRFFVRRATRRAPI
INRGYFARWSVLRKLLNQFLNAGKNSNDEKPKQVLSLGAGFDTTFFQLQDEGIAPHLYVE
LDFKEVTSKKAAIVNHYSEMKEKLGSEASISIEKGEVISTHYKLFPADIRDIPKLDSVIR
MAEMDPSLPTFIIAECVLIYLDPTATGAIVSWASEKFSTAVFFLYEQIHPDDAFGEQMIR
NLESRGCPLLGINATPTLSHKEKLFLDNGWQRAVAWDMLRIYNDFIDSQERRRNTTVWLM
ESMIQRAYFTILGSTRNSVFNAPSFVGSRGSCKLIRSKRTLEELCCE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtcagcagccgaaggtgggggaggcagcgccgccgcgcggagcagccccgcc
gccgtgcaggccaccaacgacgacgccgcggccagcaaactgtcttgtgttaacaaagga
tacatgaaggatgattacgtgcgcttttttgttaggcgtgcaacaaggagggcgccgata
atcaatcgtgggtactttgcacgttggtctgttcttaggaagcttctgaatcagttcctt
aatgctgggaagaatagtaatgatgagaagccgaagcaagtattgtctcttggcgcaggc
tttgacacaacattcttccagttgcaagatgaagggattgctccacacctttacgtagag
ttggatttcaaggaggtaaccagcaaaaaagccgcaatcgttaaccactacagtgaaatg
aaggagaagttaggctcagaagcttcaatttcgatcgaaaaaggtgaagtgataagtaca
cactacaagctatttcctgccgatattcgtgacataccaaaactggattcagttattcgc
atggctgaaatggatcctagcttgccgacctttataattgcagagtgtgtacttatatac
ctggacccaactgccacgggtgccattgttagttgggcttctgaaaagttctccactgcc
gtctttttcttatatgagcagattcatcctgatgatgcatttggggagcaaatgattaga
aatcttgagagtagaggatgccccctcctcggtataaatgctacaccgaccctgagtcac
aaagagaagcttttccttgacaatggatggcagagagctgttgcatgggatatgctgaga
atctataatgacttcattgacagccaagaaagacgcaggaacactactgtgtggcttatg
gaatcaatgattcagagggcatatttcacaattttgggttcgacaaggaatagcgtcttt
aatgccccttcgttcgttggtagccgtggcagttgtaaactgatacgttctaagcgtaca
ttagaggaactttgttgtgaatga
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