Pectobacterium parmentieri WPP163: Pecwa_3399
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Entry
Pecwa_3399 CDS
T01106
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pecwa_3399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwa03019
]
Pecwa_3399
Messenger RNA biogenesis [BR:
pwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Pecwa_3399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ACX89137
LinkDB
All DBs
Position
complement(3735871..3736407)
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AA seq
178 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGESPEQAMFRELFEEVGL
RKKDVRVLASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCNESDINMQSSGTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFINPVILLQESVAVRMAPPPPGPRRKRG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccaaacgttggtattgtaatttgtaatcggcagggg
caggtgatgtgggcccggcgctatggccagcactcatggcaatttccgcaggggggaatt
aaccccggtgaaagtcccgagcaagcgatgttccgcgaactgtttgaggaagtcgggtta
agaaaaaaggatgtgcgcgtgttggcatctacccgtaactggttacgctataaattacca
aagcgtttggtgcgttgggatacaaaaccggtctgtatcggccaaaagcagaaatggttt
ttgctacagttgatgtgtaatgagtcggatatcaatatgcagagcagcggcacgccggaa
tttgatggctggcgctgggtgagttactggtatccggtacgtcaggtcgtctcttttaag
cgggatgtgtatcgtcgcgtgatgaaggaatttatcaacccggtgatcctgcttcaggag
agtgttgcggttcggatggcgccccctccacccggtccccggcggaaaagagggtaa
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