Pseudomonas wayambapalatensis: HU734_010005
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Entry
HU734_010005 CDS
T08016
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy01501
beta-Lactam resistance
pwy02020
Two-component system
Module
pwy_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU734_010005
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HU734_010005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwy02000
]
HU734_010005
01504 Antimicrobial resistance genes [BR:
pwy01504
]
HU734_010005
Transporters [BR:
pwy02000
]
Other transporters
Pores ion channels [TC:
1
]
HU734_010005
Antimicrobial resistance genes [BR:
pwy01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
HU734_010005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QXI45071
LinkDB
All DBs
Position
complement(2250909..2252237)
Genome browser
AA seq
442 aa
AA seq
DB search
MSPLRLSMLSAALLCAPLQAAFAEAVSSQSEAKGFFEGSELNARLRNYYFNRDGKSQGPD
RRDWTQGFTLNYSSGFTQGTVGFGVEAFGHLAVKLDGGKGTSGTGNLPVRDNGAPEDDYG
RAGGALKLRISKTELRWGDLQPTAPVFAAGGTRLLPQTATGFNLLSSEIKGLDLEAGHFT
GGNGPVTTNGDHGLWASYANIQADSIDYIGGKYAVNDALSVSLYGSKLQDIWRQYYGNAN
YILALADDQSLNFDFNLYRTNDDGRADAGSINNTTWSFSTAYNFLSAHTITLAYQKVHGD
TPFDYVAFGINGPGDTGDGIFLANSIQYSDFNGPEEKSWQVRYDLDMNTFGVPGLSFMAR
YVNGHGIDGSKMASDSKYLGYGYGEDGKHHETNLEAKYVVQSGPAKDLSVRLREAIHRGN
ADQAEGDVNEFRVIVDYPLSIL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccattgcgactctccatgctgagcgcggcgctactgtgcgcgccgttgcaagcc
gcattcgccgaagccgtttcgagccagtccgaagccaagggattcttcgaaggcagcgag
ctgaacgcacgcctgcgcaactactacttcaaccgtgatggcaagtcgcaaggcccggat
cgccgcgactggacccaaggcttcaccctcaactacagctccggcttcacccagggcacc
gtgggctttggcgtcgaagcgttcggccacctggcagtcaagctcgacggcggcaagggc
acctccggcaccggcaacctgcccgtcagggacaacggtgcccccgaagacgactatggc
cgcgccgggggcgcattgaagctgcgcatctccaagaccgaactgcgctggggcgacctg
caacccaccgcgccggtgttcgctgccggcggtacacggctgctgccgcaaacggccact
ggcttcaacctgctcagcagcgagatcaaggggctggacctggaggcgggccacttcact
ggtggcaacggcccggtcaccaccaatggcgaccatggcctgtgggcctcctacgccaac
atccaggccgacagcatcgactacataggcggcaaatacgcggtcaacgacgccctgtcg
gtgtcgctgtatggctccaagctgcaggacatctggcgccagtactacggcaacgccaac
tacatcctggcgctggccgacgaccagtcgctgaacttcgacttcaacctctaccgcacc
aacgacgatggccgcgccgacgccggctcgatcaacaacaccacctggtcgttctccacc
gcgtacaacttcctctcggcgcacaccatcaccctggcctaccagaaagtgcacggcgac
accccgttcgactacgtcgccttcggcatcaacggcccgggagacaccggtgacggaatc
ttcctggccaactccatccagtactcggacttcaacggcccggaggaaaagtcatggcag
gtgcgctacgacctggacatgaacaccttcggcgtgccggggttgagcttcatggcccgc
tacgtcaacggccatggcatcgacggcagcaagatggcctctgacagcaagtacctgggc
tatggctatggcgaggatggcaagcatcatgagaccaacctcgaagccaagtacgtggtg
cagtccggcccggccaaggacctgtcggtgcgcctgcgcgaggcgatccaccggggcaat
gccgaccaggccgaaggggatgtcaacgagttccgggtgatcgtcgactacccgctgtcg
attctctga
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