Pyrococcus sp. NA2: PNA2_1613
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Entry
PNA2_1613 CDS
T01487
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pyn
Pyrococcus sp. NA2
Brite
KEGG Orthology (KO) [BR:
pyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyn03400
]
PNA2_1613
DNA repair and recombination proteins [BR:
pyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PNA2_1613
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
DEAD
TrwB_AAD_bind
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AEC52528
UniProt:
F4HJW0
LinkDB
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Position
complement(1507956..1509596)
Genome browser
AA seq
546 aa
AA seq
DB search
MDDKYIGIVRGEATFVSYEFSVNPEEDISFGEFVVTKNRNGETVLGIVRSVKNINWLLSS
AKSNFNSLKLDVYEYGDSIVENEEIVATVKILGKVDDGELVPNRVPVKNGEFVYRAPDEM
LEEIYKPDRAGIEIGTLLLRPNVKIHLDVEELVSRHFAVLAVTGAGKSNAVAVMVSEIVE
KIGGTVLVLDPHGDYVNLSLPKTGEDLVNIIEGKIKVDDLEPEELADLLEVSKNAPIQRD
YLAKAWETVKHENKEHGGRKLLEDVEALLREWMSKRIIRYWNPKKESYLTEEIKSERIES
IRGLIYRISRFLRNYGEFVTGEDLVAAIRPGMVNVIDLGPLDEEQMRLIVGKLLEKIFTT
RVEFEKARKSIRWASGRKVKEYESVMKEVKDKYPALAYPILIIVEEAHIFAPKGEESEAS
KIMSRIAREGRKFGVGLGIVSQRPSRLNEDVLSQMNTKIILRIVNPRDQDHVLNSSEQLS
RDLMEDIAGLGKGEAVIVGQAIKVPALVKIYNFKELGGRYGGEDIGIVDRWREMNSEISG
IEDIDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggatgataagtacattggcatagtcaggggtgaggccacattcgttagttacgaattc
tccgttaatccggaggaagacatctcctttggagagttcgtcgtaacaaagaataggaat
ggggagacagttttgggaatagttagaagtgttaaaaacatcaattggcttttgtcctct
gctaagagcaacttcaactcactcaagcttgatgtgtacgagtatggagatagtatagtg
gagaacgaagagatagttgcaacggtcaagatcctgggaaaggttgacgatggggagctt
gttccaaacagagttccagtcaagaatggagagttcgtttatagggctcctgatgagatg
cttgaagagatatacaaaccagatagagcagggatagagatagggactctccttctaaga
ccaaacgttaagatacaccttgacgttgaagaactcgtttcaagacactttgctgttctg
gcggttacgggagcgggtaaaagcaatgccgttgccgtcatggtaagtgagattgttgag
aagataggaggtacagtactggttttggatcctcacggcgactacgtaaatctcagcctt
cccaagacgggtgaagatctcgttaacattatagaaggaaagataaaagtagatgaccta
gagccagaggagttggccgatcttctcgaggtgtcaaagaacgctccgattcagagggat
tacttggcgaaggcgtgggaaactgttaaacatgagaacaaggaacacggtgggaggaaa
ctgctagaggatgtcgaagctcttctgagggagtggatgagcaaaaggataataagatat
tggaacccaaagaaggaaagttaccttactgaggagatcaaaagcgagaggatagagtca
ataagggggcttatctacaggataagtagattcctcagaaactatggagaattcgtgacg
ggtgaagatctagttgccgccataagaccaggtatggttaatgtgatagacttaggccca
cttgatgaagagcagatgagactcatcgttgggaagctccttgagaagatattcacaacg
agggttgaatttgagaaggcaaggaagagcataagatgggcatcaggaaggaaagttaag
gaatatgagagcgtaatgaaagaagttaaagacaagtatccagctctcgcatatccgatt
ctaattatcgtcgaggaggcccatatatttgcaccaaaaggtgaggagagtgaagcctca
aagataatgagtagaatagcaagagaaggaagaaagtttggcgttggcttggggatagta
tcgcagagacctagtagattgaacgaggacgttcttagccagatgaacacaaagataatc
ctgaggatagttaatcccagggatcaagatcacgttcttaactcaagtgagcagttgagc
agagatctaatggaggacatagctggtcttggtaagggagaagcagtgatagtcgggcag
gcaatcaaagttccagctctggtgaagatatacaacttcaaggaacttggtggaagatac
ggtggggaggatattggaatagttgacaggtggagagagatgaactccgagataagcgga
atagaagatattgacttctga
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