Rousettus aegyptiacus (Egyptian rousette): 107521033
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Entry
107521033 CDS
T06036
Symbol
SCN1A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
107521033 (SCN1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ray04040
]
107521033 (SCN1A)
Ion channels [BR:
ray04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107521033 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
107521033
NCBI-ProteinID:
XP_016020873
LinkDB
All DBs
Position
Unknown
AA seq
2009 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASLEEHSIEKNMTVNY
NGTLINETVIEFDWKSYIQDSRYHYFLEGFLDALLCGNSSDAGQCPEGYMCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAAVTASEHSREPSAAGGLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPTNGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASIL
TNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTDHFNHVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV
TLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKIASDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMH
KGIAYVKRKIYEFIQQSFVRKQKILDEIKPLDDLNNKKDSCMSNHTTEVGKDLDYLKDVN
GTTSGIGTGSSVEKYIVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEE
SKEKLNESSSSSEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEEGR
GKQWWNLRRTCFQIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTT
NGEMFEISDVNNHSDCLNLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYA
AVDSRNVELQPKYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDMFM
TEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMV
ETDDQSEYVTNILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMF
LAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPD
CDPNKVNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPL
SEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGD
RIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAV
IIQRAYRRHLLKRTVKQASFIYNKNKIKGGTNLLVKEDMLIDRINENSITEKTDLTMSTA
ACPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccgggacctgacagcttcaacttcttcactagagaa
tctcttgcggctattgaaaggcgcattgcagaagaaaaggctaagaatcccaaaccagac
aagaaagatgatgacgaaaatggcccaaagccaaatagtgacttggaagctggaaagaac
cttccttttatttatggagacatccctccagagatggtgtcagagccgctggaggacctg
gacccgtactatatcaataaaaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgctaattatgtgcactattttgaca
aactgtgtgtttatgacaatgagtaaccctcctgactggacaaagaatgtagagtacacc
ttcacaggcatatatacttttgaatcacttataaaaattattgcaaggggcttctgttta
gaagattttactttccttcgggacccatggaattggctcgactttactgtcattacgttt
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagtt
ctccgagcactgaaaacaatttcagtcattccaggcctgaagaccattgtgggagcccta
atccagtctgtgaagaagctctcagatgtcatgatcctgactgtgttctgtctgagtgtg
tttgctctgatcgggttgcaactcttcatgggcaacctgcggaataaatgtgtacagtgg
cctcccaccaatgcttccctggaggagcatagtatagagaagaatatgaccgtgaattac
aatggcacacttataaatgaaactgtcattgagtttgactggaaatcatatattcaagat
tcaagatatcattattttctggagggttttttagatgcattactttgcggaaatagctct
gatgcaggccaatgtccagagggatatatgtgtgtgaaagctggtagaaatcccaattat
ggctacacaagctttgataccttcagttgggcttttttgtcactctttcgactgatgact
caggacttctgggaaaatctttaccaactgacattacgtgctgctggaaaaacatacatg
atattttttgtgctggtgattttcttgggctcattctatctgataaatttgatcctggct
gtggtggccatggcctatgaagaacagaatcaggccaccttggaagaggcagaacagaaa
gaggctgaatttcagcagatgcttgaacagctgaaaaaacaacaggaggcagctcagcag
gcagcagctgtaaccgcctcagagcattccagagaacctagtgcagcaggtgggctctca
gatagctcatctgaagcctccaagttgagttccaagagtgctaaggaaagaagaaatcgg
agaaagaaaagaaaacagaaagaacagtctggtggagaagagaaagatgaggatgaattc
cacaaatctgaatctgaagacagcattaggcggaaagggtttcgcttctccatcgaaggg
aatcgcttgacatatgaaaagaggtactcctctccacaccagtctttgttgagcattcgt
ggctccctattttctccaagacgaaatagcagaacgagccttttcagctttagagggaga
gcaaaagatgtggggtcggagaatgactttgctgatgatgagcacagcacctttgaggat
aatgagagccggagagactccttgtttgtgccccggcgacatggagagcgacgcaacagt
aacctaagtcagaccagtagatcgtcccggatgctggcagtttttccaacaaatgggaag
atgcacagcactgtggattgcaatggtgtggtttccttggttggtggaccttcagttcct
acatcgcctgttggacagcttctgccagaggtgataatagataagccagctactgatgac
aatggaacaaccactgaaactgaaatgagaaaaagaagatcaagttctttccatgtttct
atggactttctagaagatccttcccaaaggcaaagagcaatgagtatagccagcatttta
acaaatacagtagaagaacttgaagaatccaggcagaaatgcccaccctgttggtataaa
ttttccaacatattcttaatctgggactgttcaccatattggttaaaagtgaaacatatt
gtcaacctggttgtgatggacccatttgttgacctggccatcaccatctgtattgtctta
aatactcttttcatggccatggaacactatccaatgacggatcatttcaatcatgtgctt
acagtaggaaacttggttttcactgggatctttacagcagaaatgtttctgaaaattatt
gccatggatccttactattatttccaagaaggctggaatatctttgatggttttattgtg
acacttagcctggtagaacttggcctcgccaatgtggaaggattatcagttctccgttca
tttcgattgctccgagttttcaagttggcaaaatcttggccaactttaaatatgctaata
aagatcatcggcaattcggtgggggctctgggaaatctaaccctcgtgttggctatcatt
gtcttcatttttgccgtggtcggaatgcagctctttgggaaaagctataaagattgtgtc
tgcaagattgccagtgactgtaaactcccacgttggcacatgaatgacttcttccactcc
ttcttgattgtgttccgtgtgctgtgtggagagtggatagagaccatgtgggactgtatg
gaggtcgctggtcaagccatgtgccttactgtcttcatgatggtcatggtgattggaaac
ctggtggtcctgaacctctttctggccttgcttctgagctcatttagtgcagataacctc
gcagccaccgatgatgataatgaaatgaataatctccaaattgctgtggataggatgcac
aaaggaatagcttatgtgaagagaaaaatatatgaatttattcaacaatccttcgttaga
aaacaaaagattttagatgaaattaaaccacttgatgacttaaacaataagaaagacagt
tgtatgtcaaatcatacaacagaagttggtaaagatcttgactatcttaaagatgtaaat
ggaaccacaagtggaataggaactggcagcagtgttgaaaaatacattgtcgatgaaagt
gattacatgtcattcataaacaatcccagtcttactgtgactgtaccaattgcagtagga
gagtctgactttgaaaatttaaacacagaggacttcagtagtgagtcagatctggaggaa
agcaaagagaaacttaatgaaagcagtagctcatctgaaggtagcactgtagacattggt
gcacctgcagaagaacagcctgtggtggaacctgaggaaacccttgaacctgaagcctgt
ttcactgaaggctgtgtacaaagattcaaatgttgtcaaatcagtgtggaagaaggaaga
ggaaaacagtggtggaacctgagaagaacatgttttcaaatagttgaacataactggttt
gagaccttcattgttttcatgattctcctcagtagtggtgctctggcatttgaagatata
tatattgatcagcgaaagacaattaagacaatgttggaatatgctgataaagttttcact
tacattttcattttggaaatgcttctaaaatgggtggcatatggctatcaaacttatttc
accaatgcctggtgttggctggacttcttaattgtcgatgtttcattggtcagtttaaca
gcaaatgccttaggttactcagaacttggtgccatcaaatctctcaggacactaagagct
ctgagacctctaagagccttatcacgatttgaagggatgagggtggttgtgaatgccctt
ttaggagcaattccatccatcatgaatgtgcttctggtttgtcttatattttggctaatt
ttcagcatcatgggcgtaaatttgtttgctggcaaattctaccactgtattaacaccaca
aatggtgaaatgtttgaaatcagcgatgtgaataatcattctgattgcctaaacctaata
gaaagaaatgaaactgctcgatggaaaaatgtgaaagtaaattttgataatgtaggattt
gggtatctctctttgcttcaagttgccacatttaagggatggatggatataatgtatgca
gcagttgattctagaaatgtggaactccaacctaaatatgaagaaaatttatacatgtat
ctttactttgtcattttcatcatctttggatccttcttcaccttgaacctgtttattggt
gtcatcatagataatttcaaccagcaaaaaaagaagtttggaggtcaagacatgtttatg
acagaagaacagaagaaatactataatgcaatgaaaaaattaggatcgaaaaagccacaa
aagcctatacctcgaccaggaaacaaatttcaaggaatggtctttgactttgtaaccaga
caagtttttgacataagcatcatgattcttatctgtctcaacatggtcacaatgatggta
gaaacagatgaccagagtgaatatgtaactaacattttgtcacgcatcaacctggtgttc
attgtgcttttcactggagagtgtgtgctgaagctcatctccctccgccattattatttt
accataggctggaatatttttgattttgtggttgtcattctctccattgtaggcatgttt
ctggctgagctgatagaaaaatactttgtgtcccctaccttgttccgtgtgatccgtctt
gccaggatcggccgaatcctacgtctgatcaaaggggcaaaggggatccgcacgctgctc
tttgccctgatgatgtcccttcccgcgttgtttaacatcggcctcctgctcttcctggtc
atgttcatctacgccatctttggaatgtccaactttgcctatgttaagagggaagttgga
attgatgacatgttcaactttgaaacttttggcaacagcatgatctgcctgttccagatt
accacctctgctggctgggatggattgctggcacctattcttaatagtggaccacctgac
tgtgatcctaataaagttaatcctggaagctcagttaaaggagactgtgggaacccatct
gttgggattttcttttttgtcagttacatcatcatatcatttctggttgtggtgaacatg
tacatcgctgtcatcctggagaacttcagtgttgctaccgaagaaagtgcagagcccctg
agtgaggatgactttgagatgttctatgaggtttgggagaagtttgatcctgatgcgacg
cagttcatggaatttgaaaaactgtctcagtttgcagctgctcttgaacctcctctcaat
ttgccgcaaccaaacaaactgcagctcattgccatggatttgcccatggtaagtggtgac
cggatccactgtcttgacatcctgtttgcttttactaaacgggttctgggggaaagtgga
gagatggatgctctccgaatacagatggaagagcgattcatggcttccaatccatcaaag
gtctcctatcagccaattactacgactttaaaacgaaaacaagaggaagtgtctgctgtt
attattcagcgtgcttacaggcgccacctcttaaagcgaactgtaaaacaagcttcattt
atatataataaaaataaaatcaaaggtgggacgaatcttcttgtaaaagaagacatgtta
attgacagaataaatgaaaactctattacagaaaaaactgatctgaccatgtccacagca
gcttgtccaccctcctatgatcgggtaacaaagccaattgtggaaaaacacgagcaagaa
ggcaaagatgaaaaagccaaagggaaataa
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