Rhinichthys klamathensis goyatoka (western speckled dace): 130085380
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Entry
130085380 CDS
T09701
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130085380
04131 Membrane trafficking [BR:
rkg04131
]
130085380
04121 Ubiquitin system [BR:
rkg04121
]
130085380
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130085380
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
130085380
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130085380
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130085380
BRITE hierarchy
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
130085380
NCBI-ProteinID:
XP_056107091
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MRKLCATLNSKPHEATPTTSSQIRSMYEQRLVMDQNGELQANVTKYFSAAGLRFKYPKCF
LVEDDLQGTDGSGSLGGLDVRRQIPIKLLSKQTVRGKPPARPQRPTTRLPSKSEEEPFSY
KQEERFECKSGDAYGNQRRFPQPIFWDYKLNLVGVKDDTPVHFCDKCGLPIKIYGRMIPC
KHVFCYDCALHYEKKCDKMCPGLSLYSCTDPVQRIEQCQRGSLFMCSFVQSCKRTYLSQR
DLQAHINHRHIRASKTGSSRQDPPHPTLVSDPPDRFRLPPPPHLSKSHPLIPSPLQGHDN
YNHPPPSSPSDLGPSPRPLPPETFRIATVTTRKHSNLITVPIHDDSGSLGRSPREPHPQT
PPGPPPHHLPGDYSSQPVVSHPHHIMPPPQQPHYRPPPPPPPPISIPMQHPPQGSATPHM
VYNQAPPMSTPPPPGHIISQMPPYMNHPPPGPIPHYNPNSMPQDQGTLSPPFTQPGGMSP
GMWPNSRGPHPPRMQGPPPQGQMPGPHHPDQSRYRPYYQ
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaattgtgcgcaacgttgaactccaaaccacacgaagccactcccaccacctca
tcgcagattcgcagtatgtatgaacagcgtctagtcatggaccaaaatggtgagctacaa
gctaatgtaacgaagtatttttctgcagcaggtttacgttttaaatacccaaaatgcttt
ctagtggaagatgaccttcaaggaactgatggttcaggatcccttggaggtcttgatgtt
cgcagacagatcccaatcaagttactgtctaaacagacggtaagaggcaagccgcctgcc
cgacctcagcgtcccaccaccagactgccctcaaaaagtgaagaagagcctttcagctat
aaacaagaggaaagatttgagtgtaaatctggagatgcttatggaaaccagcgcagattc
cctcagccaatcttctgggattataagctcaacttggtaggagtaaaagatgacactcca
gttcatttttgtgacaagtgtggcctgcccataaagatctatgggcgaatgattccctgt
aagcatgtgttctgctatgactgtgcattgcactatgagaagaaatgcgacaagatgtgt
cctggtttgtccctctacagctgcacagaccctgtccagcgcatcgagcagtgccagcgt
ggctccctcttcatgtgcagcttcgtgcaaagctgcaaacgcacctacctctcacagcga
gacctgcaggcccacatcaaccatcgccacataagggccagcaagaccggaagctctcgc
caggatccaccacacccgacgctggtctctgacccaccagaccgcttccggttgcctcca
cctccccacctgtctaaatcacaccctctcattccttccccactgcaaggccacgataac
tacaaccatccacctccatcctcaccctccgatctggggccttccccacggcccctcccc
ccggagaccttccggattgccacagtgaccacacggaagcatagcaacctcatcacagtg
cccattcatgatgattcggggagcttgggccgctctccccgtgagcctcacccacagaca
cctcccggcccgcctccgcaccatctccctggtgattactccagccaaccagtggtttct
cacccgcatcacataatgcccccaccacaacagccacattacaggcctccgccgccccca
cccccccctatcagcatccccatgcagcacccgccgcaaggctcggccacacctcacatg
gtttacaaccaggcacctcccatgtcaacaccccctccacctggacacatcatcagccag
atgccaccctacatgaatcaccctccaccaggtccgattccccactacaacccaaactca
atgccacaggaccaaggcactcttagcccaccttttacccaaccaggtggcatgagccca
gggatgtggcccaattcacgcggaccccatccgccccgtatgcaggggccgccaccacag
ggacagatgccagggcctcaccaccctgaccagtcacgatatagaccgtattaccagtag
DBGET
integrated database retrieval system
