Salvelinus sp. IW2-2015 (Arctic char): 111956846 Help Entry 111956846         CDS       T05762                                  Name (RefSeq) protein patched homolog 1   KO K11101   patched 2 Organism salp  Salvelinus sp. IW2-2015 (Arctic char) Pathway salp04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:salp00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     111956846 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Patched Sterol-sensing Motif Other DBs NCBI-GeneID:  111956846 NCBI-ProteinID:  XP_023833275 LinkDB All DBs Position LG32:20455757..20497349 Genome browser AA seq 1457 aa AA seqDB search MASDPRVPGSGVFGDLPPNYMRSPPPVNSDLLRRPSYCHAAFALKQISKGKAVGQKAPLW VRARFQALLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETDIEQLWVEAGSRVSR ELRYTKEKQGEESVFTSQMLIQTPKQEGTNILTQGALLLHLEAALSASKVQVSLFGKSWD LNKICYKSGVPIIENVMIERMIDKLFPCMIVTPLDCFWEGAKLQGGSAYLPGMPDIQWMN LDPLKLMEELSQFTSLEGFREMLDKAQVGHAYMNRPCLDPNDPECPLSAPNKDLRESPDI ALPLQGGCHGFSKKFMHWQEELILGGRVKDTQNALQSAEALQTMFLLMSPKQLYEHFKDD YEIHDINWNEDKATAILESWQRKFVEVAHGSIPQNSTSEIHAFSTTTLNDIMKSFSDISV IRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNAAT TQVLPFLALGIGVDDMFLLAHSFTETGINIPFKERTGDCLRRTGTSVALTSINNMIAFFM AALVPIPALRAFSLQAAIIVVFNFAMVLLIFPAILSLDLHRREDKRLDILCCFYSPCSSR VIQIQPQEFSDANDNTTHSHAPGAQTTTTYTGSTITTSTQITTTVQAFTQCDAAGQHIVT ILPPTSQISTSPPSVVVAXSPXPPXPTDXYGSQLFXPSSSTRDLLAQMDESKEXRECVPL PFFRWNLSSFARDKYAPLLLKPESKVVVVVLFVXLLGLSLYGTTMVHDGLYLTDIVPRDT KEYDFINAQFKYFSFYNMYLVTMDGFDYARSQRLLIQLHNSFISVKYVVKDSDQQLPRMW LHYFQDWLRGLQAAFDADWEAGRITWDNYRNGTEDGVLAYKLLIQTGSKKDPFNYNQLTS RRLMNEEGLIHPEVFYIYLTVWVSNDPLGYAASQGNFYPQPREWIHDKYDTTGENLRIPA AEPLEFAQFPFYLNGLRQASDFIESIESVRTICEEFTRKGVLNYPNGYPFLFWEQYIGLR HWFLLAVSVVLACTFLVCAILLLNPWTAGIIVFILAMMTVELFGIMGLIGIKLSAIPVVI LIASVGIGVEFTVHIALAFLTAIGNRNRRSAVALEHMFAPVIDGAISTLLGVLMLAGSEF DFILRYFFAVLAILTVLGILNGLVLLPVLLSLMGPPPEVTPADNGSRLPTPSPEPLPPPM THHSYYGVHGPQGPRQQAFSESSDSEYYSETTTTSGIGEEYKYCDCSPYITPPTSHILLE DSKNPSFPKLTVVKPFKEGPTVTPQKDLLNESSLNAVTSVSSQLTQWDNKHDYKSDQGPR RQHLPSDRTQGPERTNHCGPRSQTNRGPHQNRTKMPAYNGGTAPSSAVTTMVTATASVTV AVHPSLPGAYHGYMHEGYVDSESDCFEDIKRTSQSCGKATQSSKRESLEVEDLESVQNQH QANQAQVGPRIQAAKDY NT seq 4374 nt NT seq  +upstreamnt  +downstreamnt atggcctcggatcccagagtcccagggtccggtgtttttggagatttacccccaaattat atgcgttctccgccgccagtaaactcagatcttctccggagacccagctactgccatgct gctttcgcattaaaacagatttctaaggggaaggctgtgggtcagaaagccccattgtgg gttcgggcgaggttccaggctcttctattttctttgggctgtcacatccagcgacattgt ggaaaagtccttttcattggactgcttgtgttcggtgccttgtctgtgggtttgcgggtc gctgccattgagacggacattgagcaactatgggttgaagccggtagccgagtgagtcgg gagctgcgctacaccaaggagaaacagggagaggagtctgtgttcacatcacagatgctc atacaaacccccaaacaggaagggaccaacattctgacccagggtgctttgctgcttcac ctggaggcagcgctctcggccagcaaggtccaggtgtctctgtttggaaaatcatgggat ctcaataaaatctgctacaaatctggtgtccctatcatagaaaatgtcatgattgaaagg atgattgacaagctgttcccctgtatgattgttaccccactggactgtttctgggaaggt gcaaagctccagggggggtcagcatacttaccggggatgcctgacatccagtggatgaac ctggaccctctgaagctgatggaggagctcagccagttcaccagtctggagggcttcagg gaaatgctggacaaggcccaggtgggtcacgcttacatgaaccgcccctgcctggacccc aacgaccccgagtgccccctcagcgcccccaacaaggacctgagagagagtcctgacatt gccttgccgctccaaggcggttgccacggcttctccaaaaagttcatgcactggcaggag gagctkatcctgggcggycgggtcaaggacacccagaatgctttgcagagtgcggaggcc ctccagaccatgtttctcctgatgagccccaagcagctctacgagcactttaaggacgac tatgagatccatgacatcaactggaacgaggacaaggccaccgccatcctggagtcctgg caaaggaagtttgtagaggtggctcatggcagtatcccccagaattccacttcagagatc cacgcattctccaccaccaccctcaacgacatcatgaagtccttctctgatatcagtgtc atccgggtggctggaggctacctgctcatgctggcctatgcctgtgtgaccatgctccgt tgggactgtgccaagtcccagggggccgtggggctggctggcgtgctcctggtggctctg tctgtggcagctggcctggggctgtgctctctgttgggcctgtcctttaacgctgccacc acacaggttctccccttcctggctctggggatcggtgtggatgacatgttccttctggcc cactccttcactgagactggcatcaacatcccctttaaggagaggacaggggactgcctg aggaggactggcaccagtgtagcgctcacctccatcaacaacatgatcgccttcttcatg gcagccctggtccccatcccagcactgcgtgccttctctctgcaggcggccattattgtg gtgttcaacttcgccatggtgcttcttatcttcccggccatcctgagtttggacctgcac cgtcgggaggacaagcgtctggacatcctgtgttgtttctacagcccctgctcttcccgg gtcatccagatccaaccccaggagttctccgatgccaacgacaacaccacccatagccac gcgcctggcgcccagactacaacgacctacacaggctccaccatcaccaccagcacccag atcaccaccaccgtccaggccttcacccagtgtgacgctgcgggccagcacatagtcacc atcctgccccccacctcccagatctccaccagccctccmtctgtggtggtggccwcctcc ccygytcccccywcccccaccgacycctacggctcccagctcttcascccmtccagctcc acccgggacctcctggcccagatggatgagtccaaggagrmcagggagtgtgttccwcty cccttcttccgctggaacctgtcaagcttcgcccgggacaagtacgctcctctyctccta aagccagagagcaaggtggtggtcgtggtcctcttcgtgrcyctsctggggctcagcytg tacggaaccaccatggtycatgacggactctacctgaccgacattgtgccccgcgacacc aaggagtacgacttcatcaacgcccagttcaagtacttctctttctacaacatgtacctg gtgaccatggacggctttgactacgcacgctcccagcgtctcctcatacagctgcacaac tccttcatctcggtcaagtacgtggtgaaggacagcgaccagcagctgccccggatgtgg ctgcactatttccaagactggctcagaggactgcaggctgccttcgatgcagactgggag gcaggcagaatcacctgggataactaccgtaacggcactgaggatggtgttctggcctac aagctgctcatccagaccggctccaagaaggaccccttcaactacaaccagctgacttct cgtcgtctgatgaatgaggagggtctgattcacccagaggtcttctatatctacctgact gtgtgggtgagcaatgaccctctgggctatgctgcctctcagggtaacttctaccctcag cctcgcgagtggatccacgacaagtatgacaccaccggagagaatctgcgcatccctgcc gcggagcccctggagtttgctcagttccctttctatctgaacggcctgaggcaggcgtcc gacttcatcgagagcatcgagagcgtgcgcaccatctgcgaggagttcacccgtaaaggt gttctcaactaccccaacggttaccccttcctgttctgggagcagtacatcggcctgcga cactggttcctcctggcggtcagcgtggtgctagcctgcaccttcctggtctgtgccatc ctcctgctcaacccctggactgctggcatcattgtcttcatcctggccatgatgacggtg gagctgtttggtatcatgggcctgatcggcatcaagctcagtgccatcccagtggtcatc ctcatcgcctctgtgggcatcggcgtcgagttcactgtccatatcgcactggcctttctg acggccataggcaataggaacaggcgttctgcggtggccctggagcacatgtttgcccct gtgattgacggggccatctctactctgttaggggtcctcatgctggctggctccgagttt gacttcatcctgaggtacttcttcgcggtgctggctattctgaccgtgctggggatcctg aatggactggtgctgctgcccgtgctgctctccctcatgggcccacccccggaggtcacc ccggccgacaacggcagccgcctgcccaccccatcgccggagcccctcccccctcccatg acccaccacagctactacggagtacacggtccacagggcccacgacaacaggccttctca gagtcgtcggactctgagtattactctgaaacgactaccacatcaggaattggggaggag tataagtactgtgactgcagtccttacatcacccctcctacctctcatatactactggag gacagcaagaaccccagcttccccaaactcacggtggtgaaaccgttcaaagagggcccg accgtaacccctcagaaagatctcttaaatgagtcttctctgaatgcggtgacttcggtc agctctcaactcacgcagtgggataacaaacatgattacaaatctgaccagggacccagg aggcaacatttacccagtgacaggacccagggtcctgagaggactaatcactgtggtccc aggtctcagaccaacagagggcctcatcagaacaggactaagatgccggcctataatggc ggtaccgcgcccagtagtgctgttactaccatggttacggccacagcctctgtgactgtg gctgtgcaccccagcttgccgggggcctaccatgggtacatgcacgagggctacgtggac agtgaatcagactgttttgaggacattaagaggacttcacaatcttgtgggaaagctacc caatcttccaagcgtgaatccttggaggttgaagacctggaatctgtacagaaccagcat caggcgaaccaggcacaagttggcccacggatccaggcagccaaagattactag

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