Salmo salar (Atlantic salmon): 106568302
Help
Entry
106568302 CDS
T04363
Name
(RefSeq) zinc finger SWIM domain-containing protein 6-like
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106568302
Cilium and associated proteins [BR:
sasa03037
]
Other cilia and associated proteins
Stereociliary proteins
106568302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
106568302
NCBI-ProteinID:
XP_013993989
UniProt:
A0A1S3LTU3
LinkDB
All DBs
Position
ssa13:complement(91826576..91890169)
Genome browser
AA seq
1136 aa
AA seq
DB search
MAERVQQPPAKRLCCRPGYNTNCRQGQRAGGTLCGGSGAAQGGSSKSQTPESLLDISARK
VAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFSTGGEESGTSGENSDET
RLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPATPSESELVCSVSVSFDRCKITAVTCS
CGNKDIFYCAHVVALALYRVRKPEQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVL
PTAQKLADEILSTNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQVKLFLSQGGYHG
SGKQLNLLFSKVREMLKMRDSNGARMLTLITEQFMGDPRLALWRQQGTTMTDKYRQLWDE
LGTLWMCIVLNPHCKSEQKCVWLRQLRRWNSVDVCPWEDGNHGNELPNLTHALPHGNPDL
SSRPHRTVFTRAIEACDLHWQDTHLQCVITHDLCTHTHTHTHCPHDNHGSGGALFDARGW
PLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLKRQQQKQLQLLRNHKKELLHKGM
TSVTNMEGWVGHPLDPIGTLFSTLLDTGRGDEEGGNAFLDFSGSVSSAKRSEPHLFPAQH
FLDDGQSFVALAVEAALIGLGQQRVMPDGLYAQEKVCRNEEQLLAKLQEVELNDALVKIF
RKQAVFLLEAGPYSGLGELLYRESVPMHTFAKYLFTSLLPHDAELAYKIALRAMRLPVLE
TTAPSGDLSRPHHIVSMVPNRYPRWFTLSHIESQQCELASTMLTAAKGDGRKLETVLESI
QKNIHSSSHIFKLAQDAFKIATLMDSLPDLTLLKVSLELGLQVMRMTLSTLNWRRREMVR
WLVTCATEVGVYALDSIMQSWFTLFTPTEATSIVATTVMSNTTIVRLHLDCHQQENLASS
ARTLALQCAMKDPQNCSLSALTLCEKDHIAFETAYQIVLDAAVTGMSYTQLFTIARYMEH
RGYPMRAYKLATLAMAHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAVIPLVVKSVK
CATVLSDILRRCTLTTPGMVALHSRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTH
ISPRHYSEFIEFLSKARETFLMAQDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcgttcagcagcccccagccaaacggctctgctgtagaccgggttataac
acgaattgtagacagggacaacgggccgggggtacgttatgtggcggttcgggtgcggcc
caaggcgggtcgagcaaaagccagaccccggagtctctgttggacatctcggcccggaaa
gtggctgagaagtggccgtttcaacgggtagaggagcgcttcgaacggatcccggagcct
gtacagagacggatcgtttactggtcttttccacggagtgaacgggagatctgcatgtat
tcttcgttcagtacagggggagaggagagtggaactagcggggaaaatagtgatgagacg
cggctgcctttcagacgaggcatcgctctgttggagagcggctgtgtggacaacgtattg
caagtcgggttccacctcagcggaacggtaacagaaccggccacgccgtcggaatccgag
ctcgtctgcagcgtgagtgtcagcttcgaccgctgcaagatcaccgcggtcacatgcagc
tgtggcaacaaggacatcttctactgcgcgcatgtggtagcgctggccctgtaccgcgta
cggaagcccgagcaggtcaaactgcacctgcccatctcagagacactgttccagatgaac
agagaccagctgcagaaatttgttcagtacctgataacagtacaccacacggaggtgctg
cccactgctcagaaactagctgatgagattctgtcaacaaactctgagatcaaccaggtc
catggggccccagaccccacggcaggggccagtgtagatgatgagaactgttggcacctg
gatgaggagcaggtccaggagcaggtgaaactcttcctttcacagggaggataccatggc
tctgggaaacaactcaacctgctgttcagcaaggtgagagagatgttgaagatgcgtgac
tccaacggtgccaggatgttaacgctgatcacagaacagtttatgggcgaccctcgtctg
gcactgtggagacaacagggaaccaccatgaccgacaaatacagacagctgtgggatgag
ctaggcaccctgtggatgtgtattgtgctgaacccccactgtaagtcggagcagaagtgt
gtgtggctgagacagcttagacggtggaacagcgtcgatgtgtgtccatgggaggacgga
aaccatggcaacgaactacccaacctcacacacgcactaccgcacggcaacccagacttg
tcgtctcgtcctcataggacagtgtttacgagggccattgaggcctgcgacctgcactgg
caggacacacatctgcagtgtgtcatcacacatgacctctgcacacacacacacacacac
acacactgtccacacgacaaccacggcagtggaggggcactgtttgacgcccgcggctgg
cccctctggcacgagcacgtcccaacagcgtgtgcgagggttgacgcactgcggtcacat
ggttatcctagggaagccttgcgattggccattgctattgtcaacacactcaaacggcag
caacagaaacaactacagctcctccgcaaccacaaaaaagagctgctccataaaggcatg
acgtcagtcactaacatggaggggtgggtgggccacccgctggaccctattggcactctg
ttcagcaccctactggacactggacggggagacgaggaggggggcaacgccttcctagac
ttctcaggctctgtgagttcagccaaaaggtcggagccccacctcttcccagcacaacac
ttcctggacgatggccaatcgttcgtagcactggctgtagaggcggctctgattggctta
gggcagcagagggtgatgcctgatggcctatacgcccaggagaaggtgtgtcgcaacgaa
gagcagctattggccaagctccaggaagtggaactgaatgatgccctggtcaagatcttc
cgcaagcaagcagtcttcctgctagaggctggtccatacagtggtctaggagagttgctc
tacagagagagtgttcccatgcatactttcgccaagtatctcttcacctccctactacct
cacgacgctgaactggcgtacaaaattgcactgagagccatgaggttaccggtcctggaa
accacggctccatcaggtgatctatccagacctcaccatatagtatctatggtccctaac
cgctaccctcgctggttcactctgtctcacatagagtcacaacaatgtgaactggcctcc
accatgcttaccgcagccaaaggtgatgggcgtaagttagaaacggtgttagagtccatc
cagaagaacatccactcctcgtctcacatcttcaaactggctcaggatgccttcaagatc
gctactctgatggacagcctgccagacctcacactgcttaaagtctcactggagctgggc
cttcaggtgatgagaatgactctgtccacgttgaactggaggaggagagagatggtacgg
tggctggtcacctgtgccacagaagttggtgtgtatgcgttggacagcatcatgcagagt
tggttcaccctgttcaccccgaccgaggccaccagcatcgtggccaccaccgtcatgtcc
aacaccaccatcgtccggctgcacctggactgtcaccagcaggagaacctggcctcctcc
gcccggacactggccctccagtgtgccatgaaggacccccagaactgttccctctccgcc
ctcaccctctgtgagaaggaccacatcgccttcgagacagcctaccagatcgttctggac
gcggccgtcacggggatgagctacacacagctctttacgatagccaggtacatggagcac
agaggatatcccatgagggcatacaagctggccacgctagccatggcccaccttaacctc
agctacaaccaggacacccacccagctatcaacgacgtgctgtgggcctgcgctctgagt
cactctctggggaagaatgagctggctgccgtcatccccctggtggtgaaaagtgtgaag
tgcgccactgtgctgtcagacattttgagacggtgcacattgaccacgccgggcatggtg
gcgctgcacagccgcaggaactctgggaagctgatgtcgctggacaaggctccactcagg
cagctgctggacgccaccatcggagcctacatcaacaccacgcactctcgcctcacgcac
atcagcccgcgccactacagcgagtttatagagttcctcagtaaggccagagagacgttc
ctcatggcccaggacggacacatccagtttacccagttcatagacaacctcaaacagatc
tacaagggcaagaagaaactcatgatgctcgtacgggagaggttcggttga
DBGET
integrated database retrieval system
