KEGG   Salicibibacter cibarius: HUG15_12620
Entry
HUG15_12620       CDS       T07370                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
scia  Salicibibacter cibarius
Pathway
scia03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scia00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HUG15_12620 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scia03019]
    HUG15_12620 (rny)
Messenger RNA biogenesis [BR:scia03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HUG15_12620 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2 Pilin_N Exonuc_VII_L
Other DBs
NCBI-ProteinID: QQK76313
UniProt: A0A7T6Z3V9
LinkDB
Position
complement(2439003..2440574)
AA seq 523 aa
MNGTLILIISILLIVVAVLSGFIGYVIRKKIAEAKITSAEYAANKMIEEAERDADNSKKE
SLLEAKDEAYRLRSEAEDDIRERRTEIQNQESRLQQKEEALDRKSETLDNKEESLELREQ
TLAEKQEETETMNSKVEQLISEQQEELERISGLTREDARQIVRAETERELDHEKAVMIKE
NTDKVKEEANKKAKDILSVALQRCAADHVAETTVSVVHLPNDEMKGRIIGREGRNIRALE
TLTGIDLIIDDTPEAVILSGFDPIRREIARTALERLVQDGRIHPARIEETVDKSRREVDE
RIREYGEETTFEMGIHHLHPDLLKILGRLRFRTSYGQNVLNHSTEVAYLTGLMAAELGED
VQLARRAGLLHDIGKAIDHEVDGSHVEIGVELTKKYNENEVVVNSVASHHGDVEATSVIA
TLVAAADALSAARPGARRETLETYIRRLEKLEEIAESFDGVEKTYAIQAGREVRIMVKPD
LVDDVLAHRLARDITKRVENELDYPGHIRITVIRETRAVNYAK
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgaacggaacactcatcttgatcatctccattttgcttattgtcgttgctgttttaagc
gggtttattggttatgtcatccgtaaaaaaattgccgaagcaaagattacgagtgcagaa
tatgcggcaaataagatgatcgaagaagcggaacgcgatgcggataacagcaagaaagaa
tcactgttggaagccaaagatgaggcgtaccgcttgcgttccgaagccgaagacgatatt
cgcgaacggagaaccgaaattcagaatcaggaaagccgccttcagcaaaaagaagaggcg
cttgaccgtaaaagtgaaacgcttgacaacaaggaagaatctctagaactccgggagcaa
acgctcgctgagaaacaagaagagacagaaacgatgaatagcaaagtggaacaattaatt
tccgaacaacaggaagaactggaacggatctcggggctgacgagagaagacgcccgacag
attgtccgggctgaaaccgaacgggaactcgatcatgaaaaagcagtgatgattaaggaa
aatacggataaagtcaaggaagaagcaaataagaaagccaaagatattctttctgtggca
ctgcaaagatgcgcggctgatcatgtggcggaaacgacggtatccgttgtccatttgccg
aatgatgaaatgaaaggccgaatcatcgggcgtgaagggagaaatattcgcgcgttggag
acgttaaccggaattgatttaatcatagacgatacacccgaggcggtcatcctatccggc
ttcgatccgattcgaagagaaatcgcgcgcacggcgttggagcggctcgttcaagatgga
cggattcaccccgcccgcattgaagaaaccgtggataaatcccggcgtgaggtcgatgaa
cggatacgtgaatatggggaagaaacgacgtttgaaatggggattcatcatttacatcct
gatcttctcaaaattttgggccgtctgcgatttagaacgagctacgggcaaaatgtcttg
aatcattcaacggaagtcgcgtatttaacaggtttaatggcggcggaacttggagaagat
gtgcagcttgcccgtcgggcaggattgcttcatgatatcggaaaagcgattgaccatgag
gtcgacggcagtcatgttgaaataggtgtcgaattaacgaaaaaatacaatgaaaacgag
gtcgttgtgaacagcgttgcctctcatcacggggatgtcgaagcaacttcagtcattgct
acactcgtcgctgctgcagatgccctgtctgcggcaaggccgggtgcaagacgggaaacg
cttgaaacgtacattcgccgtttggaaaaactcgaggagattgcagaatcatttgatggt
gttgaaaagacgtatgccatacaagcgggtcgcgaagtccgcattatggtaaaaccagac
ttggtcgacgacgtgttggcccatcggctggcacgggacattacgaagcgagtggaaaat
gaacttgactaccccgggcatatacgaatcaccgttattcgtgaaacgagggcagtaaat
tatgcaaaataa

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