Streptomyces cyaneofuscatus: R2B67_20680
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Entry
R2B67_20680 CDS
T09646
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
scye
Streptomyces cyaneofuscatus
Brite
KEGG Orthology (KO) [BR:
scye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scye03016
]
R2B67_20680
Enzymes [BR:
scye01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
R2B67_20680
Transfer RNA biogenesis [BR:
scye03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
R2B67_20680
Prokaryotic type
tRNA splicing ligases
R2B67_20680
BRITE hierarchy
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WOP10799
LinkDB
All DBs
Position
4677368..4678561
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AA seq
397 aa
AA seq
DB search
MSYVEVPGAKVSIRMWTDPASVEDVAMQQLRNVSTLPWIKGLAVMPDVHFGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVRTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDGAVDPG
RLHGFPTSGWDDFWGRFDGIAEAVKFRQERATKQMGTLGSGNHMIEFCLDSDGSVWLMLH
SGSRNIGKELAEHHIGIAQKLPHNQGIVDRDLAVFISDTPQMAAYRNDLYWAQEYAKYNR
AIMMALFKDVVRKEFKKAKPVFEQEISCHHNYVAEERYDGADLLVTRKGAIRAGSGEYGI
IPGSMGTSSYIVKGLGNEKAFNSASHGAGRRMSRNAAKRRFTVRDLEEQTRGVECRKDSG
VLDEIPAAYKPIEQVMEQQRDLVEVVAKLKQVICIKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtagaggtgccgggggcgaaggtctccatccggatgtggaccgatccggcg
tcggtcgaggacgtggcgatgcagcagctgcggaacgtgtccacgctgccgtggatcaag
ggtctcgccgtcatgccggacgtccacttcggcaagggggccacggtcggttcggtgatc
gcgatgcagggtgcggtctgcccggccgcggtgggggtcgacatcggctgcgggatgtcc
gcggtccggacgtccctgacggcgaacgatcttcccggcgacctgtcacggctgcgctcc
aagatcgagcaggccattccggtgggccgcgggatgcacgacggcgcggtggacccgggg
aggctgcacgggttcccgacgtccgggtgggacgacttctgggggcggttcgacgggatc
gccgaagcggtcaaattccgtcaggaacgtgccacgaagcagatgggaacgctcggatcg
ggcaaccacatgatcgagttctgcctggacagtgacgggagcgtgtggctgatgctgcac
tccggctcccggaacatcggcaaggagctggccgagcaccacatagggatcgcgcagaag
ctgccgcacaaccagggcatcgtcgaccgggacctggcggtgttcatctcggacactccg
cagatggccgcctaccggaacgatctgtactgggcgcaggagtacgccaagtacaaccgc
gcgatcatgatggcgctcttcaaggacgtggtccgcaaggagttcaagaaggcgaagccg
gtcttcgagcaggagatctcctgtcaccacaactacgtggcggaggagcggtacgacggg
gcggacctgctggtcacccgcaagggcgcgatccgcgcgggctccggtgagtacgggatc
atccccggctcgatgggcaccagctcgtacatcgtgaagggtctcggcaacgagaaggcg
ttcaactcggcctcccacggagccggtcgccggatgagccggaacgcggccaagcggcgc
ttcacggtgcgtgacctggaggagcagacgcgcggtgtggagtgccgcaaggactccggc
gttttggacgagatcccggccgcgtacaagccgatcgagcaggtcatggagcagcagcgc
gatttggtcgaggtcgtcgcgaagctcaagcaggtcatctgtatcaagggctga
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integrated database retrieval system
