Seriola dumerili (greater amberjack): 111223064 Help Entry 111223064         CDS       T05606                                  Name (RefSeq) aggrecan core protein-like   KO K06792   aggrecan 1 Organism sdu  Seriola dumerili (greater amberjack) Brite KEGG Orthology (KO) [BR:sdu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:sdu00535]     111223064    00536 Glycosaminoglycan binding proteins [BR:sdu00536]     111223064    04091 Lectins [BR:sdu04091]     111223064 Proteoglycans [BR:sdu00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    111223064 Glycosaminoglycan binding proteins [BR:sdu00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    111223064 Lectins [BR:sdu04091]  C-Type lectins   Group 1: Proteoglycan core proteins    111223064 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Xlink Lectin_C Sushi EGF V-set hEGF EGF_MSP1_1 I-set Izumo-Ig EGF_3 Motif Other DBs NCBI-GeneID:  111223064 NCBI-ProteinID:  XP_022602800 LinkDB All DBs Position Unknown AA seq 1559 aa AA seqDB search MIRWTVLLCVCLNVISATFDYILTDPEDVLSVSIPLEGPQRPLLGVTMVLPCYFEDHTVP DPGAPTIVPLSHRIKWSLVTKEKVTTILVALEGQVRITESYLDRVQLVGYPGTPTDASIK ISELRSSDTGVYRCEVQHGIEDNHDIVHVQVQGIVFHYRAIMGRYSLTFEKAKAACTENS AVMASPEQLQAAYDDGFHQCDAGWLSDQTVRYPIRDPRVNCYGDKEELPGVRTYGVRDLN ETYDVYCFAEKMTGRVFYTASAEKFSFSEAVEACSKQGARLATTGQLYLAWQGGMDVCNA GWLGDRSVRYPINIRRPQCGGGLLGVRTVYLHTNQTGYPFPESHYDCFCYTESPDEEGSG IIEEGSGTLSVTTVTQSPEVFFMRTTTESEAIGEVETQQPTVVDFTYTDSPTELPLPQPP NATELITDLIKSVTARPDVGRDPSRTFVMPPTGVVFHYRSGSARYAFTFVEAQLACQRIG ASIATPEQLQAAYEAGYHQCDAGWLLDQTVRYPIVSPRDKCGGDLGYHPGVRSYGLRPAD ERYDVYCYIDGLKGEVFHMGLAEGFTYDEAVSSCQEQNAVLASTGQLYAAWKMGFDKCRA GWLVDRSVRYPINNPRAQCGAGKSGVHTVYVDPNRTRYPDPDARFDAYCFRADVLLIANE TGLNITDIQEILLNLTAITDLLRPAVPSIAPPIPVETSGSGSGSADFSSGSGSAVDSASG GHSGDLSGSGDLSGSGDQVVSGDQSASGDQVVSGDQSASGDLSGSGDQVVSGDQSASGDL SGSGDHITSGDQSASGDLSGSGDQVTSGDQSASGHLSGSGDQVTSGDQSASGDLSSSGDQ VTSGDQSASGDLSCSGDLAGSVTDKLASGESGLSSADASGSGLSGEESGFTVVFSGIDSI VSGEGSVSGGLQEAEEGSTGILIFDSSDAGSGVLSGSGDQSGYGSGSGFSSVESGSSSDI SGESGEFSGMTSGFLTSWDFSGFSGFPSGFSSGSASGESGELSGSGDPQILLIDDELIDA SAPITHREHELGGGLLVFSGSGDISGSGILSGDLSGSASGSGSGFSSDVTFVGSGLTELT LSSSGEQEASGFLLYSSGQGSGEHLSGFGSSSFISGSGSEMSGSGMSGSESSASGEEGSV TFLSGDFITKVSRDATLSLELGQGSVEYSGDGSSSSSGFYSGSGDGYSSTASGSSSGASS GYLTQVVLPSPSSEWALTESTTGPEEARSGADLSQTHHDVYVTQGPALAPAGLAAPPTAA TPASVQTPGIVEKTESVAGGFNPCDPNPCGAASCTVEDGVALCHGESQNSDVDVCHSNPC ANGATCVESADSYKCLCLPSYGGERCEIDEQQCEEGWTKFQGNCYLHFSDREMWLDAEGR CRDLNAHLVSIITPEEQDFVNSNAQDYQWIGLNDKTVENDFRWTDGTPLQFENWRPNQPD NYFNSGEDCVVMIWHENGQWNDVPCNYHLPFTCKKGPVSCGAPPEVENAHMFGNKKEEYP VNSIIRYQCNPGFKQRHPPVVRCKADGQWEKPQVECTDVKARKRIQRKSSRSPASSKLH NT seq 4680 nt NT seq  +upstreamnt  +downstreamnt atgatcaggtggaccgtgctgctgtgtgtgtgtctgaatgtcatctcagcaacatttgac tacattttgacagacccggaggatgtgctgagtgtgagcattcctctggagggaccacag cgccctctactgggagtaacgatggtactaccgtgttactttgaggaccacactgtccca gacccaggagctcccaccatcgtccccctctctcatcgcatcaaatggagcctcgtcact aaagaaaaagtcacgaccatccttgtggccttggaaggacaagtgcgtatcacagagagc tacctggacagagttcagctggtgggttaccctggaaccccaacagacgctagcatcaag atatctgagctacggtccagtgacacaggagtgtatcgctgtgaggttcagcatggcatc gaggacaaccacgacatcgtccatgtgcaggttcaaggtatcgtgttccactaccgggcc atcatgggtcgttacagtttgacttttgaaaaggcgaaggcagcatgcaccgagaacagt gcagtcatggcttcacctgaacagcttcaagcggcctacgatgatggtttccaccagtgc gacgccggctggctctctgatcagactgtcaggtacccaatccgtgaccctcgtgtgaac tgctacggtgacaaagaggaactgcctggggtcaggacgtatggagtcagagacctcaat gagacttacgatgtctactgcttcgctgagaagatgacaggcagagttttctacactgct tctgcagaaaagttcagcttctctgaggctgtggaggcgtgctctaagcagggagctcgg ctggccaccacaggtcagctctacctggcctggcaaggtgggatggatgtctgcaacgcc ggttggctgggagaccggagcgtccgctatcccatcaacattcgtcggccgcagtgtggg gggggtctgctgggggtgcgaacagtttacctccacacaaaccagacaggatacccattc cctgaatcccactatgattgcttctgctacacagagtcccctgatgaggaaggttcaggc atcatagaagagggaagtggcacgctgagtgttaccacggtgacacagagcccagaggtg ttcttcatgaggacgaccacagagagcgaggcgatcggagaggtggagactcagcaaccc accgttgtggacttcacctacacagatagccccaccgagctgccgctgcctcagccgccc aacgccactgagctcatcaccgatctgataaagtcagtcaccgctcggcccgacgtaggc cgggatcccagcagaacctttgtgatgcctccaactggtgtggtcttccattaccgctca ggctccgctcgctacgcgttcaccttcgtcgaggctcagctggcctgccagagaattgga gcctccatcgccacgccagagcagctgcaggcagcatacgaggctggatatcaccagtgt gatgcaggatggttactggaccagactgtaaggtatcccattgtttcccctcgagataag tgtggtggagatctgggataccatcccggagttcggtcttatggtttgaggccagcagac gagagatacgacgtgtactgctacattgatgggctcaaaggtgaggttttccacatggga ttggctgagggtttcacctacgacgaggctgtttctagctgtcaagagcagaacgcggta ttggcctccactggacagctctacgcagcctggaaaatgggtttcgacaagtgccgcgct ggctggctagtggatcgtagcgtccgttatcctatcaacaaccctcgtgctcagtgtgga gcagggaaatcaggagtgcacaccgtgtacgttgaccccaaccggacacgctaccctgat cctgacgctagatttgatgcatactgtttcagagcggacgttctacttattgcaaatgag actgggctgaacatcacagatatccaggagatcctcctcaacctgacagcaattactgat ttattgaggcctgctgttccctctatcgcccctcctatccctgtggagacatcaggctct ggttcaggctcagcagacttcagctcgggttcagggtctgcagttgatagtgcctctggg ggtcactctggagacctgtccggttctggagacctctctggttctggagaccaggttgtg tctggagatcaatctgcttctggagaccaggttgtgtctggagatcaatctgcttctgga gacctgtctggttctggagaccaggttgtctctggagatcagtctgcttctggagacctg tctggttctggagaccatattacctctggagatcaatctgcctctggagacctgtcaggc tcgggagaccaggttacctctggagatcaatctgcctctggacacctgtcaggctcggga gaccaggttacctctggagatcaatctgcctctggagacctgtccagctctggagaccag gttacctctggagatcaatctgcttctggagacctgtcttgttctggagatctggctggt agtgtgactgataagctggccagtggagaatcaggtcttagcagtgcggacgcttctgga tcaggtcttagtggagaagaatccggcttcactgttgtgttttcaggcattgacagcatt gtctctggagagggctcagtttcaggaggactccaagaagctgaagaggggagcacaggg atccttatcttcgattcatctgacgcaggctctggagtgctcagtggtagcggcgaccag tcaggatatggctcgggatctggattcagctctgtggagagtggctcttcctcagacatc tctggggaaagtggagaattctctggcatgacgtccggtttcctcaccagctgggacttt tctgggttcagtggtttcccatcaggtttctcctctggaagtgccagtggagagtcagga gagctttcagggagcggagaccctcagatcttgctgattgatgatgaactgattgatgca tctgctcctattactcacagggagcatgagctcggaggaggcctactggtgttcagtggc tctggagacatttcaggatctggcattctcagtggtgatctcagtggctcggcttcaggg agtggctcagggttctcctcagatgtgacctttgtggggtcagggttaactgagctgaca ttgtcatcctctggagagcaggaggcctctgggtttttactctacagttctggacaggga agtggtgaacatttatctggatttggaagctcaagtttcatctctggatctggatcggaa atgtctggatcaggaatgtctggatctgagtcctctgcaagcggagaagaaggcagtgtt acattcctgagtggggatttcataacaaaggtatccagagatgctacactgtctttggag cttggacaggggtcagtggagtacagtggagacggaagcagtagcagcagtggcttctat tcgggcagcggagacggctactcgtccacagccagcggcagttcatcgggcgcttcctct ggatatctgacgcaggtggtgctgccctctccatccagcgaatgggcactcacagagagc acgacaggaccggaggaggcccgtagtggggcggacctgtcacagacccatcatgatgtc tacgtgacccaaggccctgcactcgcccctgcaggactggctgctccccccaccgcagct acaccagcgtccgtgcagacaccaggcattgtggaaaaaactgagtcagtagcaggtggc tttaacccatgtgaccccaacccctgtggtgctgcttcatgcacagtagaggatggagtc gctctctgccatggtgagtcccaaaacagtgacgtagatgtgtgccattccaacccgtgt gccaatggagccacctgtgtggagagtgcagactcttacaaatgcttatgcctgcccagc tatggaggggaacgctgtgagatcgatgagcagcagtgtgaagaaggttggactaagttt caggggaactgctacctgcacttctctgacagagagatgtggctagatgcagagggtcgc tgccgggacctgaacgcccacctggtcagcatcatcaccccagaggagcaagactttgtc aattcaaacgcacaggactaccagtggattgggctcaatgacaagacagtagaaaacgac ttccgctggacggacggcactccactgcaatttgagaactggaggccaaaccagccagat aattacttcaactcgggagaggactgtgtggtaatgatctggcacgagaacggccagtgg aacgacgtgccctgcaactaccacctgccattcacctgcaagaaaggcccagtgtcttgt ggcgccccgccggaggtcgaaaacgctcacatgtttggtaacaagaaggaggagtacccc gtcaactccatcatccggtatcaatgcaacccaggatttaaacagcgccacccaccggtg gttcgctgcaaagcagacggacagtgggagaaaccccaggttgaatgtactgacgtgaaa gccagaaaaagaatacagcggaagtccagcagaagtccggccagtagcaagcttcactga

DBGET integrated database retrieval system