Solanum dulcamara (climbing nightshade): 129889632
Help
Entry
129889632 CDS
T09577
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 5
KO
K14811
ATP-dependent RNA helicase DBP3 [EC:
5.6.2.7
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129889632
Enzymes [BR:
sdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129889632
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
Helicases
129889632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
UTP25
CMS1
Motif
Other DBs
NCBI-GeneID:
129889632
NCBI-ProteinID:
XP_055820997
LinkDB
All DBs
Position
5:complement(71791819..71802826)
Genome browser
AA seq
555 aa
AA seq
DB search
MVAKQLDDEPQTLTNSANYESKSHKKHKRKLEDPEAEEVVVESKKEKKKKKKQKQKQEQE
GSNGNTETLNGSDGNAEIFDGSAELYEKKEKEKKMRENTVEEQSLNNGSVVNGEVKESST
NVVVTGKGANESKYKALTKFVESGLPSEVLECCKNFEKPSPIQSHSWPFLLDGRDFIGIA
KTGSGKTLAFGIPAIMHIMSKRKSKKSKNPVCLVLSPTRELAQQISDVLCEAGKPTGVQS
VCLYGGVDKHHQKASLRSGVDIVIGTPGRLQDMMEMGACNLKEVSFVVLDEADRMLDLGF
EPAVRAILSQTCSVRQMVMFSATWPPAVHQLAQEFMDPNPIKVVVGSEDLAANHDVMQIV
EVLEDRARDERLQCLLEKYHKSRRNRVLVFVLYKKEASRVEMMLQKRGWKAVSISGDKQQ
HARTKALSLFKDGSCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGK
KGVAHTFFTKDNKGLSGELINVLREAGQTVPAALLNFGTHVKKKESKLYGAHFREIDANA
PKATKIKFGDSDNED
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaaagcagttagatgacgaaccacaaaccctcaccaattcagcaaactatgaa
tccaaatctcataagaaacataagagaaagcttgaagaccctgaggctgaagaagttgtt
gtagagtcgaaaaaagagaaaaagaagaagaagaagcagaaacagaagcaagaacaagaa
gggtctaatgggaatacagaaactcttaatggttcagatggaaacgctgaaatatttgat
gggtcagctgagttatatgaaaagaaggagaaggagaagaagatgagggagaacacggta
gaggaacagagtttgaataatgggtctgttgttaatggggaggttaaagaaagtagtaca
aatgtggtggttactggtaaaggtgctaatgagtcaaagtacaaagctttaacaaagttt
gtggagtcagggcttccaagtgaggtattggaatgttgcaagaatttcgagaaaccatca
ccaattcaatctcattcatggccttttcttttagatgggcgtgatttcattggaattgct
aaaactggatcaggtaagacattggcttttggtattccggctattatgcacatcatgagt
aagcggaagagtaaaaagtctaagaatcctgtttgccttgtactttcgcctacaagggag
ctagctcaacaaatatcagatgttctctgtgaggctgggaagcctactggtgtgcagtca
gtttgtctatatggcggagttgataagcaccatcaaaaggcttctcttagatctggtgtg
gatattgttattggaaccccaggtcgtttgcaagatatgatggaaatgggagcttgcaac
ctaaaagaggtttcttttgtggtgctagatgaagctgatcgcatgcttgatttaggtttt
gaaccagcagtccgtgccatattgagccaaacatgctctgttcggcagatggttatgttc
agtgctacatggcctccggctgttcatcaattagctcaagaattcatggatcccaatcca
atcaaggtagttgtaggttccgaagatttggctgccaaccatgatgtcatgcaaattgtt
gaggtcttggaggatcgagcacgtgatgagcgtttacaatgcttgctggaaaaataccac
aagtctagaaggaatagagtattggtttttgttttatacaagaaggaagcatctcgtgtt
gaaatgatgctacagaaaaggggttggaaagctgtgtccattagtggtgacaagcaacaa
catgctcgtactaaggcgctgtcactcttcaaggacggaagctgtcctcttatgatagct
actgatgtagctgctcgaggactggatatacctgatgttgaagttgtgataaattatagt
ttccctttgacaacagaggattatgttcacagaataggaagaactggaagggctggtaaa
aaaggtgtagctcatacattcttcactaaggataacaaggggctttctggggagttgata
aatgtcctcagagaagctggacagactgttccagctgcccttcttaactttggaacccat
gtaaagaaaaaggagtccaagctctatggtgctcattttagagaaattgatgcaaatgct
cccaaggctaccaaaataaaatttggcgattctgataacgaagattga
DBGET
integrated database retrieval system
