Saccharopolyspora erythraea: SACE_1406
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Entry
SACE_1406 CDS
T00492
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
sen
Saccharopolyspora erythraea
Pathway
sen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SACE_1406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sen03019
]
SACE_1406
03009 Ribosome biogenesis [BR:
sen03009
]
SACE_1406
Enzymes [BR:
sen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
SACE_1406
Messenger RNA biogenesis [BR:
sen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SACE_1406
Ribosome biogenesis [BR:
sen03009
]
Prokaryotic type
rRNA processing factors
SACE_1406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
Motif
Other DBs
NCBI-ProteinID:
CAM00728
Kitasato:
SACE_1406
Cambridge:
SACE_1406
UniProt:
A4F9K3
LinkDB
All DBs
Position
1553575..1556802
Genome browser
AA seq
1075 aa
AA seq
DB search
MLNMDTPAGSASGPSPTPTQEDQGTFELPAKLRVHALAKLLGASSREIITTLESLGESVR
SAQSNITREVAMQVVRTLHPEQIAEPEQGAEDTSRQQAAGKPEEPAQPQAQPGAESARKQ
QAQPTRDEESAEGKAAESKPAEGKATEGEAGDKSAEVAPVKAPNPGFLAAQESEPTRSGA
PGLTPVFAAPQAMFLAPDPKTAPAKPEPEQKQAQAEEEQQETATEAPQQSESADTGEDEG
DQGGRRRRRRGRRGRGRGRGAEGEQDEQQRETSEADTTEQDGKAEQAEPATEQQSEEAAE
AAETDGDSAEGNRRRRRRRRRKGSGDDDSGTRDDDPPNTVVHVRESAPEGRHDSSDDEVR
AVKGSTRLEAKRQRRRDGREAGRRRAPVLSEAEFLARRESVDRRMVVRENGDQTQIAVLE
DNVLVENFVTSAGSGSLVGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLYAGEVDWDAAGL
AGKARRIEQALSTGDSVLVQVTKDPVGHKGARLTTQISLPGRFLVYVPGGGATGISRKLP
DNERKRLKEILKRIVPENAGVIIRTASEGTSEEALDRDVRRLQAQWEVIKEKADSPKAQA
PQLLYEEPDLLIKVVRDLFTEDFSAMAVQGNQAWDTIEAYVKHVAPDLAGRLSKHVGKND
VFTEQRISEQIAKALDRKVWLPSGGYLVIDRTEAMTVIDVNTGKFTGSGGNLEETVTRNN
LEAAEEIVRQLRLRDIGGIIVIDFIDMVLESNRDLVLRRLTECLGRDRTRHQVAEVTSLG
LVQMTRKRVGTGLLEAYSSTCEHCRGRGLLVSTDPVTHAHTNGSGGGGGGGRRNRNRGKS
QEPETPVVEAAPAAEPEAKAEPAAEAPKPEKQEKPQKQEKAERKAAAAAEQPVRADKAPE
PAKAEQPVEAERAEPVKATEPAPAPEAVEEPVAEQPEAAAPAAEPVRASQPEEAAPTPAS
QPEPAAEESSEPAVNGRARRRKVSRPAGSAGAPAAPVVVAVPAKPAESSESQDNGVPSTP
PPAAAAVSRRRGRSASRPAGPPVDGGQNRQSDAAADGAAGTSEESGESSGASAES
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacatggacacgcccgctggaagcgccagcgggccatcgcccacacctacccag
gaagatcaggggacgttcgaactgcccgccaagctgcgggtgcacgcgctggccaagctg
ctcggagcgagcagccgcgagatcatcacgacgctggagtcgctcggcgagtcggtgcgc
agcgcgcagtcgaacatcacccgcgaggtcgcgatgcaggtcgtccggaccctgcatccc
gaacagatagccgagccggagcagggcgccgaggacacttcccggcagcaggccgccggc
aagccggaggagcccgcccagccgcaggcgcagccgggagccgagtccgcgcggaagcag
caggcccagcccacgcgcgacgaggagtccgccgagggcaaggcggctgagagcaagccc
gccgagggcaaggccaccgagggtgaggccggggacaagtccgccgaggtcgcgccggtc
aaggcaccgaaccccggcttcctcgccgcccaggagtccgagcccacccgcagcggcgca
cccggcctgaccccggtgttcgccgcgccgcaggcgatgttcctggccccggacccgaag
acggcgcccgccaagcccgagcccgagcagaagcaggcccaggccgaggaggagcagcag
gagaccgcgaccgaggcgccccagcagtccgagtccgccgacaccggtgaggacgagggc
gaccagggcggccgccgccgtcgccgccgcggccgccgcggccggggccgtggccgcggg
gccgagggcgagcaggacgagcagcagcgcgagacgtccgaggccgacaccaccgagcag
gacggcaaggccgagcaggccgaaccggcgaccgagcagcagtccgaggaagccgccgag
gccgcggagaccgacggcgactccgcggagggcaaccgccgtcgtcgccgtcgccgtcgc
cgcaagggctccggggacgacgacagcggtactcgcgacgacgacccgccgaacaccgtc
gtgcacgtccgcgagtccgcgccggagggacgccacgacagcagcgacgacgaggtgcgc
gcggtcaagggctcgacgcggctggaggccaagcgccagcgccgccgggacggccgggag
gccggccgcaggcgcgccccggtgctgtcggaggccgagttcctggcgcgccgcgagtcg
gtggaccgcaggatggtcgtccgcgagaacggcgaccagacccagatcgcggtgctcgag
gacaacgtcctcgtcgagaacttcgtgacctcggcgggcagcggctcgctggtcggcaac
gtctacctgggccgcgtgcagaacgtgctgcccagcatggaggccgctttcgtcgacatc
ggccgcggccgcaacgccgtgctctacgccggtgaggtcgactgggacgccgccggcctg
gcgggcaaggcgcgccgcatcgagcaggcgctgtccaccggcgacagcgtgctggtgcag
gtcaccaaggaccctgtcggccacaagggtgcgcgcctgaccacccagatcagcctgccc
ggccgcttcctggtgtacgtgccgggcggcggtgccaccggcatcagccgcaagctgccc
gacaacgagcgcaagcgcctcaaggagatcctcaagcggatcgtgccggagaacgccggc
gtgatcatccggaccgcctccgagggcaccagcgaggaggcgctggaccgcgacgtccgc
cgcctgcaggcccagtgggaggtcatcaaggagaaggccgactcgccgaaggcgcaggcg
ccgcagctgctctacgaggagcccgacctgctcatcaaggtcgtccgcgacctgttcacc
gaggacttctcggcgatggcggtgcagggcaaccaggcctgggacaccatcgaggcctac
gtcaagcacgtcgcgcccgacctggccggacgcctcagcaagcacgtcggcaagaacgac
gtgttcaccgagcagcggatcagtgagcagatcgccaaggcgctggaccgcaaggtctgg
ctgccctccggcggctacctggtcatcgaccgcaccgaggcgatgacggtgatcgacgtc
aacaccggcaagttcaccggatccgggggcaacctggaggagacggtcacccgcaacaac
ctggaggcggccgaggagatcgtgcgccagctccggttgcgcgacatcggcggcatcatc
gtcatcgacttcatcgacatggtgctggagtccaaccgcgacctggtgctgcgcaggctg
accgagtgcctgggccgcgaccgcacccggcaccaggtcgccgaggtgacctcgctcggc
ctggtgcagatgacccgcaagcgggtcggcacggggttgctggaggcttacagcagcacc
tgcgagcactgccgcgggcgcgggctgctggtgtcgaccgacccggtcacccacgcccac
accaacggcagcggaggcggcggtggcggtggccgtcgcaaccgcaaccggggcaagtcg
caggagccggagacgccggtcgtggaggccgccccggccgcagagccggaggcgaaggcc
gagccggccgccgaggcgccgaagccggagaagcaggagaagccgcagaagcaggagaag
gcggagcgcaaggcggccgccgcggcggagcagccggtgcgggccgacaaggcccccgaa
ccggcgaaggcggagcagccggtcgaggccgagcgtgccgagccggtgaaggcgaccgag
ccggcgcccgcgccggaggccgtcgaggagcccgtcgccgagcagcccgaggcggccgcg
cctgccgccgagcctgtccgcgcttcgcagccggaggaggccgcaccgacccccgcttcg
cagcccgagccggccgcggaggagtcgtcggagcccgccgtcaacggccgtgcgcgtcgg
cgcaaggtgagcaggcccgcgggcagcgcgggcgcaccggcggcgccggtggtggtggcc
gtgcccgcgaagccggcggagtcgtcggagtcgcaggacaacggcgtgccgagcacgccg
ccgccggccgcggcggcggtgtcgcggcgccggggccgctcggcgtcgcgcccggccgga
ccgccggtcgacggcggccagaaccggcagtccgacgccgctgccgacggtgccgcgggc
acgtccgaggagagcggcgagagctcgggagcgtccgccgagagctga
DBGET
integrated database retrieval system
