Saprospira grandis: SGRA_1062
Help
Entry
SGRA_1062 CDS
T01764
Symbol
gadB
Name
(GenBank) pyridoxal-dependent decarboxylase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
sgn
Saprospira grandis
Pathway
sgn00600
Sphingolipid metabolism
sgn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
SGRA_1062 (gadB)
Enzymes [BR:
sgn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
SGRA_1062 (gadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AFC23797
UniProt:
H6L3F0
LinkDB
All DBs
Position
1088249..1089700
Genome browser
AA seq
483 aa
AA seq
DB search
MNKIPNKGQDQQHILAQLKAFKGKDLPWQAGKIFAYIYQTTPEAKAVAEAAYLSFLPENG
LDPTAFPSLLHLEQQIIGQLAPLLGGNEDVKGNCTSGGTESVILAVKAARDYARAKYPDQ
KEFEILVPSTAHPCFYKAAHYLNIGIQSIDVDPQTQRLKVADMRAAISKKTILLVGSAPS
YAHGVMDPIAELSDLALEKDLLLHVDACVGGMYLPFLRQLGHEVPPFGFELPGVTSISCD
LHKFGYVPKGCSTILYRNKELRQHQIFSCSQWPGYTVINPTVLSSKTGAPMAAAWAMFQY
MGLEGYQNAVADCQAARDAVIAALEQLPSLQLIGQPDMSLLAFASKDEDLSIFDLADQLN
EKGWYVQVQLASPHSPAAIHLSISHFNCPHIPSFVADLQETVAELMSNPVEENELLAALD
HSMLALLMEDFDPAMLGQFQELMGLESAEGGLPADMGAVNQLLNVLSAKQREDVLLAFMN
ELI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagataccgaataaaggccaagatcaacagcatattttagcgcaattaaaggcc
tttaaagggaaagatttaccctggcaagcagggaaaatctttgcctatatttaccaaacc
acccccgaggccaaggcggtggccgaggcggcctacctttcttttttgcccgaaaatggc
ttggaccccacggctttcccctcgcttttgcatttggagcagcagattattggacagcta
gcgcctttgttgggcggcaatgaagacgtaaaaggaaattgtacctctggcgggaccgaa
agcgtgattttagcagtaaaagcggcccgagattatgcccgagccaagtatcccgatcaa
aaagagtttgaaattttggtcccttctacggcgcatccttgcttttataaggcggctcat
tatctaaatattggcattcaatctatagatgtagacccgcaaacacaacgcctaaaggtg
gccgatatgcgggccgctattagcaaaaaaacgattttgttggtgggctctgcgccctct
tatgcgcatggcgtgatggaccccattgccgagctttctgatttggccctagaaaaagat
ttgcttttgcatgtagatgcttgcgtgggcggtatgtatttgccctttttgcggcagttg
ggtcatgaggttccgccctttggctttgagttgccgggcgtgacttctatttcttgcgat
ttgcataagtttggctatgtgcccaagggctgctctacgattttgtaccgcaataaggag
ctccgccaacaccagatttttagttgctcgcaatggccaggctatacggtgatcaatccc
acggttttatcgagtaaaacaggggcgcctatggcggccgcttgggccatgtttcaatat
atgggcctagaaggctaccaaaatgcggtggccgattgccaggcggctagagatgccgtg
attgcagctttggagcagttgcctagccttcaattgattggccagcccgatatgagtttg
ctggcttttgcgagtaaagatgaggacctcagcatttttgatttggccgatcagctcaat
gaaaagggctggtatgtgcaagttcaattggcgagcccgcattctcctgcggccattcat
ttgagcattagtcattttaattgcccacatattccaagttttgtcgctgatttgcaggaa
actgtagccgagctcatgagtaatccagtagaagaaaatgagctattagctgccctcgac
cattctatgttggcccttttgatggaagattttgatcccgctatgttgggccaatttcaa
gaattgatgggcctagagtctgcagaaggcggcctaccggccgatatgggcgcggtcaat
cagttgctcaatgttctttcggccaagcaacgagaagatgttttgctggcctttatgaat
gagttgatttaa
DBGET
integrated database retrieval system
