Strigops habroptila (Kakapo): 115607340
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Entry
115607340 CDS
T08851
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
115607340 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115607340 (RAG1)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115607340 (RAG1)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115607340 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-RING_6
zf-C3HC4_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
115607340
NCBI-ProteinID:
XP_030340397
LinkDB
All DBs
Position
4:complement(68048491..68051589)
Genome browser
AA seq
1032 aa
AA seq
DB search
MSVASQMDLPEEIQHPYTNFSEWKFKLFKVRSFEKLPSDDINKGKAEVVASSNKDIILRK
YEAVPRGENMDLVGNRLAFENDDKNMKTQDNKAHQNNLKHLCRICGVSFKTDCYKRTHPV
HGPVDDETMRLLRKREKKATSWPDLISKVFKIDVRGDVDTIHPTRFCHDCWSIIHRKFSN
TPYKVCFPRNSMKEWQRHSPNCDVCRTTHRGVKRKSQSRSVQHGKHAKTVAEYAQINRSV
KNQAQINKNLMKEIVSCKNIHLSTKLLAVDYPVDFIKSISCQICEHILADPVETSCRHLF
CRTCILKCIKVMGSYCPSCWYPCFPTDLVIPVKSFLNILDNLGIRCPVKECDEEILHEKY
GQHLSSHKEMKDRELYSHINKGGRPRQHLLSLTRRAQKYRLRELKRQVKAFAEKEEGGDI
KSVCMTLFLLALRAKNEHRQADELEAIMQGRGSGLHPAVCLAIRVNTFLSCSQYHKMYRT
VKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLSGLPLSIDD
YPVDTIAKRFRYDAALVCALKDMEEEILEGMKAKNLDDYLSGPFTVVVKESCDGMGDVSE
KHGSGPAVPEKAVRFSFTVMNIAIAHGNESKRIFEEVKPNSELCCKPLCLMLADESDHET
LTAILSPLIAEREAMKNSELLLEMGGILRTFKFIFRGTGYDEKLVREVEGLEASGSTYIC
TLCDSTRLEASQNVVFHSITRSHAENLERYEIWRSNPYHESVDKLRDRVKGVSAKPFIET
VPSIDALHCDIGNAAEFYRIFQMEICEVYKNPDLSKEERKRWQLALDKHLRKKMNLKPMM
RMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPAKECPELLC
QYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNESGNKL
FRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLRNQGFTIDPEDTLGDSVP
LDILESNDSGEV
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagcatcacaaatggacctgcctgaagaaattcagcatccatataccaatttt
tctgaatggaaattcaagctgtttaaagtgagatcatttgaaaaactgccttctgatgac
ataaacaagggtaaggcagaagtggttgcttcttcaaacaaagacatcatactgcgtaaa
tatgaagcagtgccaagaggagaaaacatggacttagtgggcaataggctggcatttgag
aatgatgacaagaacatgaaaacacaagacaataaagctcatcagaacaatctgaagcat
ctttgccgcatctgtggagtttcatttaaaactgattgttacaagagaactcacccagtg
catgggccggtggatgatgaaactatgaggcttctgagaaagagagagaaaaaagcaacc
tcttggccagatcttatctctaaggtttttaagattgatgtgcgaggggatgttgatact
atccatcccactcgattttgtcacgattgctggagcattatccatagaaaattcagtaat
actccatataaagtatgttttcctaggaacagcatgaaggagtggcaacgccactcccca
aactgtgatgtgtgccgcactacccatcggggagtcaagagaaaaagccagtcacgcagc
gtacaacatggcaaacatgcgaagactgttgcagaatatgctcaaataaacagaagtgta
aagaaccaagcacagataaacaaaaatttaatgaaagagattgtcagttgcaagaatata
catctcagcaccaagcttcttgcagtcgattaccccgtagatttcattaaatctatctct
tgccagatctgtgagcatattttggcagatccagtggaaacatcatgtaggcacttgttt
tgcagaacttgcatccttaaatgtatcaaggttatgggcagctattgcccctcctgctgg
tatccttgcttccctactgatctggtcatcccagtgaaatccttcctgaacatccttgat
aatctgggtataagatgccctgtaaaggaatgtgatgaagagatcttgcatgaaaaatat
ggtcaacacctctccagccacaaggagatgaaagatagagagctctacagccacataaat
aaaggtggccgaccaaggcagcatctcctgtctttgaccaggagagctcagaaatatcgt
ctgagagaactgaagcgtcaagtcaaagcttttgctgagaaagaagagggaggtgatata
aagtctgtatgcatgactttgttcctgctagctttaagagcaaaaaatgaacaccgacaa
gcagatgaattggaggctataatgcaagggaggggatctggacttcaccctgcggtctgc
ttggcaatcagagtcaacacgtttctcagctgtagccagtatcataaaatgtatagaaca
gtaaaagctgtcactggaaggcagatctttcagcctttgcatgctcttcgcactgctgag
aaagccctcctaccaggttatcatccatttgagtggaaacctccattgaaaaatgtatcc
accaacacagaagtgggaattatagatggactatcaggattgccactctcaattgatgac
tacccagtagacacaattgcaaagagatttcggtatgatgcagccttggtttgtgcctta
aaggacatggaggaggagatcttggaaggcatgaaagcaaaaaacctggatgattatttg
agcggtcccttcactgtggtagtaaaagagtcctgtgatggaatgggagatgtcagtgag
aagcatggaagtggacctgctgtcccagagaaggccgttcgcttttctttcacagtcatg
aacattgctatagcacatgggaatgaaagcaagaggatctttgaagaagtaaagcccaat
tcagagctgtgttgcaagcccttgtgccttatgctggctgatgaatcggatcatgaaact
ctgacagcaatcctgagccccctcatagcagaaagagaggctatgaaaaacagtgaactg
ctacttgaaatgggaggcatcctgagaacattcaaattcatctttaggggtacaggatat
gatgagaaactcgtgcgggaagtggaagggctggaggcctcaggttccacttacatttgt
accctgtgtgactcaacccgcctggaggcatcccagaatgtggtcttccactccataacc
aggagccatgctgaaaatctggagcgatatgaaatatggaggtccaacccatatcatgaa
tctgttgataagctccgtgacagagtgaagggtgtttcagccaaaccttttattgagact
gttccctccatagatgcgttgcactgcgacattggaaatgcagcagaattctataggatt
ttccagatggagatctgtgaagtttataagaatcctgatctgtctaaagaggaaaggaag
aggtggcagttggctcttgacaaacacctcaggaagaagatgaacttgaagcctatgatg
aggatgagtggaaattttgctagaaagctcatgtccaaagagacagtagaggcagtatgt
gaattaataaagtgtgaagaaaggcatgaggccctgaaagaactaatggacctttatctg
aagatgaagccagtgtggcgatcctcatgccctgccaaagaatgtccagaattgctgtgc
cagtatagctataattcacagcgttttgccgagctcctatctacaaagttcaaatacaga
tatgaaggcaagattacaaattatttccacaaaacccttgctcacgttcctgaaatcatt
gaaagagatgggtccattggggcctgggcaagtgaaggaaatgagtctggaaacaaactg
tttaggaggttccgaaaaatgaatgccaggcagtccaaatgctatgagatggaggatgtc
ttgaagcatcactggctatatacctcaaagtacctccagaagttcatgaatgctcataaa
acattaagaaaccagggcttcaccattgatccagaggatactttaggtgactccgtgcca
ctggatatcttggaaagcaatgattcaggggaagtctaa
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