Sphingomonas hankookensis: PPZ50_09155
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Entry
PPZ50_09155 CDS
T08811
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
shan
Sphingomonas hankookensis
Pathway
shan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PPZ50_09155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shan03019
]
PPZ50_09155
Messenger RNA biogenesis [BR:
shan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PPZ50_09155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
WCP70563
LinkDB
All DBs
Position
complement(1924413..1924892)
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AA seq
159 aa
AA seq
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MDKTALPYRPCAGVMLLNRDGQVFVGQRLDSTLEAWQMPQGGIDDGEAPIDAAIRELREE
TGIGADKVRLIAEGPEELFYDLPDDMIGKIWKGKWRGQRQRWFLFAFEGADDDIDIRTPE
PEFRAWRWADPADLPTMIVPFKKALYEQVLAGFAEHLHR
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaccgccctcccctatcgcccctgtgccggcgtcatgctgttgaaccgcgac
ggacaggtgttcgtcggccagcggctcgattcgacgctggaggcgtggcagatgccgcag
ggcgggatcgacgatggcgaggcgccgattgacgccgcgatccgcgagctgcgcgaggaa
accggcatcggggcggacaaggtgcggctgatcgcggaagggccggaagagctgttctac
gacctgcccgacgacatgatcggcaagatttggaaggggaaatggcgcgggcagcggcag
cgctggttcctgttcgcgttcgagggggcggacgacgatatcgacatccgcacgcctgaa
ccggaattccgcgcgtggcgctgggccgatccggccgatctgccgacgatgatcgtgccg
ttcaagaaggcgctgtacgaacaggtactggcggggttcgcggagcatctgcatcggtga
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