Scomber japonicus (chub mackerel): 128357013
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Entry
128357013 CDS
T09718
Symbol
cacna2d3a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04260
Cardiac muscle contraction
sjo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128357013 (cacna2d3a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
128357013 (cacna2d3a)
04261 Adrenergic signaling in cardiomyocytes
128357013 (cacna2d3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128357013 (cacna2d3a)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128357013 (cacna2d3a)
BRITE hierarchy
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
128357013
NCBI-ProteinID:
XP_053173206
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All DBs
Position
4:19449781..19571455
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AA seq
1088 aa
AA seq
DB search
MQVDRSCVVSSACLFLLFSTISTRVSGVGGSHQSIPPSVVKLWASAFGGEMKSISAKYSG
SQLLQKKYKEFERAVRVQEIDGLRLVKRLAEDMEEMFHKKAQAMKRLVEAAEEAHLQHEE
DPNLQYEYFNAVLINEVDEEGNSVELGGEFILQPNDHFNNLSVNLSLSVVQVPTNMYNKD
SAIVNGVFWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAFDCR
NRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNEELH
YVEPCLNGTLVQADVTNKDHFREHLDKLFAQGIGMLDIALTEAFNLLSDFNETGRGSECS
QAIMLVTDGAVDTYDAIFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFTQIS
TLADVQENVMEYLHVLSRPKVIDREHDTVWTEAYIDSTLPQAQKLDDGQGPVLMTTVAMP
VFSTKNETRNRGILLGVVGTDVPVSELLKTIPEYKLGIHGYAFAITNNGYILTHPDLRPL
YGDGKKRRKPNYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVKKSVDKGKRVLVLHN
DYYYTDIKGTPFSLGVALSRGHGKFFFRGNVTVEEGLDDLEHPDVALADEWTYCNTDEHP
EHRYLTQIEAIKLYLSGHEPHLQCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENSDKG
VEIAYLGTRTGLSRINLFVVPDELTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFV
YSLPFNTGSENKSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQKKFWTASRQCAALDG
KCSISCDDENINCYLIDNNGFVLVAEDYTLTGKFFGEAEGAVMSKLLQMGSFKRVTLYDY
QALCWVYSESSDSGHTLLDPYFAFFSAVKWILTELVIFLVEFNLYSWWHSDLIAKAQRIG
RTMVPCDTEYPAFVSERTIKENTGNIDCDGCIKSFVIQQIPSSNLFMVVVDNKCDCSMFE
PITMDPIEIMYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECGGAVCLTPSFAATLLC
ILLVLFPR
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggatcggagctgtgtggtatcaagtgcgtgtctgtttttacttttctccact
ataagcaccagggtcagtggagtgggaggctctcaccaaagcatccctccgtccgtggtg
aagctgtgggcttcagcttttggtggggagatgaagtccatctctgcaaagtactctggc
tcccagctgctgcagaagaaatacaaggagtttgagcgggcagtgcgggtgcaggagatt
gatgggctgcggctggtaaagaggctggcagaagacatggaggagatgttccacaagaaa
gcccaggcgatgaagcgactagtagaggcagcagaggaagcccacctacagcacgaggag
gatccaaaccttcagtatgaatacttcaatgccgtattgatcaatgaggtggatgaggag
gggaacagtgtagagctagggggagaattcatcctgcaacccaatgaccactttaacaac
ctgtcagtcaacctcagcctcagcgtggtccaggttcccaccaacatgtacaacaaagac
tctgcaattgtcaatggggtgttctggtctgaggccttgaataaagtgtttgtggataac
tttgagagagacccatcacttatatggcagtacttcggcagtgccaagggctttttcagg
cagtatccagggatcaaatggaagccagatgaacacggggtgatagcttttgactgtcgt
aaccggaagtggtacatccaggctgccacttctccaaaggatgtggtgatcctggtggat
gtcagtggcagcatgaaaggcctgaggctgaccatcgccaggcaaactgtctcctctata
ctggacactcttggagatgacgacttcttcaacatcatcgcttacaatgaagaattgcat
tatgtggagccgtgcctgaatggaactctggtccaagcagacgtcaccaataaagatcat
ttccgtgagcacctcgacaagctgtttgctcaaggcattggtatgttagacatagctctg
actgaggccttcaatcttctcagtgacttcaacgagactggaagaggtagtgagtgtagc
caggccattatgttggtgacagatggagcagtggatacatatgatgccatctttgccaag
tataactggccagagaggaaggtccgcatattcccttacctgattggtcgagagtcggcc
ttcgcagataatctgaaatggatggcatgtgctaacaaaggctacttcactcagatttcc
acattggctgatgtgcaagagaatgtgatggagtatctccatgtgctgagtcggcctaag
gtgatcgaccgggagcatgatactgtgtggactgaggcctacatcgacagcaccctcccc
caagcacaaaagttggatgatggtcaaggtccggttctgatgaccactgtggcaatgcct
gtgttcagcaccaagaatgagacgagaaatcgtggcatcctactaggggtggttgggaca
gatgttcctgtctccgagctgctcaagaccatcccagaatataagctgggcattcacggc
tacgcctttgcaatcaccaacaatggctacatcctcacccatccagatctacggccactt
tatggggatggcaagaagcgaaggaagccaaactacagcagtgtggatttgtctgaggtg
gaatgggaggataaagatgacacgctgagaaatgccatggtcaacaggaagacagggaca
ttttccatggaggtgaagaagagtgtcgacaaagggaaacgtgtgctggtgttgcataat
gattactactacacagacatcaaagggacaccattcagtctaggcgtagctctctccaga
ggccacggcaagttcttcttcagagggaatgtgacagtggaggaaggacttgatgacttg
gaacaccctgatgtagcgctggcagacgaatggacatattgcaacactgatgagcaccca
gagcaccgctatctgacccagatagaggcgatcaaactctatctcagtggacacgagccc
cacctacaatgtgacaaggagctgattcaagaggttctttttgacgcagtggtaactgcc
cctttggaggcctattggaccagcttggtgctcaataagtctgagaactctgataaagga
gtggagatagcatacctgggcacaagaacaggcctgtccagaataaacttgtttgtggtg
cctgacgagcttacaaatcaagacttcttgacagctgaagacaaagagggggtgttcaac
gccgatcactttcccctgtggtacaagagagcagcagaacaagttcctggtacatttgtc
tactccctgcctttcaacacaggatcagaaaacaagagcgttgtattggccagcactgcc
attcagcttctggatgagaggaaatcaccaatagctgcggctgtgggcatccagatgaaa
ctggaattctttcagaagaaattttggacagccagtagacagtgtgcagctctagatgga
aaatgctccataagctgtgatgatgagaacatcaactgctacctcatcgacaacaatggc
ttcgttctggtagcagaagactatacgctgacagggaaattttttggagaagcagaggga
gctgtaatgagtaagcttctgcagatgggctctttcaagagggtcactctgtatgactac
caggctctatgttgggtctattcagagagtagtgacagtggacacacactgttggatcct
tactttgcattcttctcagctgtgaagtggatccttactgagcttgtcatattcttagtc
gagttcaacttgtacagctggtggcactctgatctcatagctaaagctcagaggataggt
cggaccatggtaccatgtgacacagagtacccagcctttgtctccgagagaaccatcaaa
gaaaacacaggaaatatcgactgtgatggctgcatcaagtcctttgtgatccagcagatc
cccagcagtaatctcttcatggtggtggtggacaacaagtgtgactgcagcatgttcgag
ccaatcaccatggaccccatcgaaatcatgtataatgaatctctcaagtgtgaaagactg
aagatgcaaaaggacaggaggcgcccagatacctgtcacccttttcatccagaggagaac
tcaatggagtgtggaggagctgtgtgtctcaccccatcattcgcagcaacactgctctgc
atcctcctggtgctgttccccaggtga
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