Scomber japonicus (chub mackerel): 128357231
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Entry
128357231 CDS
T09718
Symbol
galns
Name
(RefSeq) N-acetylgalactosamine-6-sulfatase
KO
K01132
N-acetylgalactosamine-6-sulfatase [EC:
3.1.6.4
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00531
Glycosaminoglycan degradation
sjo01100
Metabolic pathways
sjo04142
Lysosome
Module
sjo_M00077
Chondroitin sulfate degradation
sjo_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
128357231 (galns)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128357231 (galns)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.6 Sulfuric-ester hydrolases
3.1.6.4 N-acetylgalactosamine-6-sulfatase
128357231 (galns)
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Motif
Pfam:
Sulfatase
Sulfatase_C
Phosphodiest
SGSH_C
DUF229
Motif
Other DBs
NCBI-GeneID:
128357231
NCBI-ProteinID:
XP_053173496
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Position
1:25448580..25469285
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AA seq
521 aa
AA seq
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MSTQTLAFFCVIICFSWTEKAFAGSSPNIIIMLMDDMGWGDLGVFGQPSKETPNLDAMAA
EGMLLPDFYTANPLCSPSRAALLTGRLPVRNGFYTTNAHARNAYTPQEIVGGISKDEILL
PQMLKRKGYISKIVGKWHLGHRPQYLPLENGFDEWFGAPNCHFGPYNSSIRPNIPVYNNS
EMVGRYYEEFQIDRKTGESNLTQIYLQEGLNFILRQTKAQKPFFLYWAADATHAPVYASK
HFLGKSQRGRYGDAVMELDYSIGQILSHLRTLGIENNTFVFFTSDNGAALTSGPNESGSN
GPFLCGKETTYEGGMREPAIAWWPGHIKEGTVNFQLANVMDLFTTSLALAGVSPPDDRTL
DGLDLTHVLLNHSQTLESRPIFYYRGNELMAVRLGQYKAHYWTWSNSWDELKQGINFCPG
QEVPGVTTHDQKEHTLQPLIFHLGRDPGEKFPISVLTKEYRDVLRRISPVVELHKKTLLP
GIPQLNMCDIAVMNWAPAGCEKLGKCLKVPKSAPWKCDWPH
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtctactcaaactttggctttcttttgtgtaataatatgtttctcctggacagagaag
gcgttcgctggttcatctccaaacataatcatcatgctcatggatgacatgggttggggg
gacttgggggtgtttggccagccctctaaggagacccccaacctggatgccatggctgct
gaaggcatgttgcttccagacttctacactgcaaacccgctctgttccccatccagagct
gcacttctcactgggaggctgcctgttcgaaatggtttctacaccactaatgcccacgcc
agaaatgcatacacaccacaggagatagttggaggaatctccaaggatgagatcttgtta
ccgcagatgctgaagagaaaaggctatatcagcaagatagttggcaagtggcatcttggc
caccgaccacagtaccttcctctggagaatggctttgatgaatggttcggtgccccaaac
tgccactttggtccctacaacagcagcatcagacccaacatccctgtctacaataactct
gagatggttggcagatactatgaggaatttcagattgacaggaagactggagagtccaac
ctcacacagatctacttgcaggaaggcctcaacttcatactccggcagactaaggcccaa
aagccgttcttcctatactgggcagctgatgccactcatgcccctgtctacgcctccaag
cacttcctaggaaagagccagcgaggccggtatggagatgcagtgatggagctggactac
agcattggtcagatcttgtcacatcttcggactctgggcatcgaaaataatacctttgtc
ttcttcacttcagacaatggagctgctcttacgtctggcccaaatgagagtggtagtaat
gggccattcctttgcggaaaggagaccacctatgaagggggcatgagggagccagcaatt
gcctggtggcctggtcacatcaaagaaggcacggtgaatttccaactagccaatgtgatg
gacctattcaccaccagtctggctctggctggcgttagccctcctgatgaccgaaccctg
gatggactagacttgacgcatgtcctgcttaaccactcacagacactggaaagcagacca
atcttttattaccgtgggaatgagctgatggctgtgaggcttggacagtacaaggcgcac
tactggacctggagcaactcatgggatgagttaaaacagggtatcaacttctgtccaggt
caagaagtcccaggtgtgactactcacgatcagaaggagcacacactgcagccactcatt
ttccacctggggcgggatcctggggaaaagttccctatcagtgttttgacgaaggagtac
cgtgatgttctgcgcaggatctcgccagttgtggagctgcacaaaaagactctgctgcct
ggcatcccccagctcaacatgtgtgatatagctgtgatgaattgggcccctgcaggctgc
gagaagttaggaaagtgtctcaaagtgccaaaatctgctccctggaagtgtgactggcct
cactaa
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