Scomber japonicus (chub mackerel): 128378757
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Entry
128378757 CDS
T09718
Name
(RefSeq) retinoic acid receptor alpha-B-like
KO
K08527
retinoic acid receptor alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128378757
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128378757
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128378757
Nuclear receptors [BR:
sjo03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
128378757
BRITE hierarchy
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128378757
NCBI-ProteinID:
XP_053194318
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All DBs
Position
18:6422353..6440101
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AA seq
491 aa
AA seq
DB search
MYESVDVVGLSPSPSSPSPGSFLSMDYYHRPPGLGQEKGLLSGVGVLQRPFGGSLVSSRH
WSGSSHSIETESTSSGEDLLVPSPPSPPPPPRIYKPCFVCQDKSSGYHYGVSACEGCKGF
FRRSIQKNMVYTCHRDKVCVINKVTRNRCQSCRLQKCLDVGMSKELVRNDRTKKKKEEKR
PVEVEVYVLSADTEQMIERVRRAHQDTFPSLCQLGKYTTNNSAEHRVPLDVNLWDKFSEL
STKCIIKTVEFAKQLPGFTTLTIADQITLLKSACLDILILRICTRYTPDQDTMTFSDGLT
LNRTQMHNAGFGPLTDLVFSFANQLLPLEMDDAETGLLSAICLLCGDRQDLEESDKVDIL
QEPMLEALKIYVRRRRPEKPCMFPKILMKITDLRSISVKGAERVITLKMEIPGSMPPLIQ
EMLENSEGLEGHGAGGAKGGGGGKGRGGGGGSRKEDETEPGSRHTNPSPKSLPSPSSSPV
PCSPSPSSPST
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaagcgtggatgttgtgggtttgagccccagccccagcagcccaagcccgggc
tcttttcttagcatggactactaccacagacccccggggctcgggcaggagaagggactc
ctgtccggtgtaggagtactccagcggccgttcggagggtccttggtgagcagcaggcac
tggagcggatccagccactctatagagaccgagagcacgagttctggggaggacctgctg
gtgccgagccccccctcacctccacctccgccccgcatctacaagccctgctttgtgtgt
caggacaaatcttcaggataccactacggagtcagcgcctgcgagggttgcaagggtttc
tttcggaggagcatccagaagaacatggtgtacacatgtcaccgagacaaagtgtgcgtt
ataaacaaagtgacgaggaaccgctgtcagtcctgtcgactgcagaaatgcctcgacgtc
ggcatgtccaaggagttggtgcgaaatgacaggacgaagaagaagaaggaggagaagagg
ccggtggaggtggaggtgtacgtcctgtcagcagacacggagcagatgatcgagcgcgtt
cgccgggcgcaccaggatacctttccctccctctgccagctggggaaatacaccacgaat
aacagtgcagagcatcgtgttcctctggatgtcaatctctgggacaagttcagtgaactc
tccaccaaatgcattataaagacggtggagtttgccaaacagctgccgggcttcaccaca
ttaaccatcgctgatcagatcaccctgctcaaatccgcctgcctcgacatactgattctg
aggatctgcactcgctacaccccagaccaggacaccatgaccttctcagacggtttgact
ctgaaccgcacccagatgcacaacgccgggttcgggccactcaccgatctggtgttctcc
ttcgccaaccagctcctcccgctggagatggacgacgcagagacgggattactgagcgcc
atctgcctgctctgtggagaccgtcaggatctggaggagtcagacaaagtggatattctt
caagaaccaatgctcgaagctttgaagatctatgtgaggaggaggagacctgagaaaccc
tgcatgttccccaaaatactgatgaaaattactgacctcaggagcatcagtgtgaaggga
gcggagcgagtgatcacactgaaaatggagattcccggctccatgccccctctcatccag
gagatgctggagaactctgagggactggaggggcacggtgctgggggagccaaaggagga
ggaggaggaaaaggaagaggaggaggaggaggaagcagaaaagaggatgaaacggagccc
ggaagccgccacacaaatccgtccccaaaatctctcccctctcccagctcgagccctgtt
ccttgctctccctctccttcctccccttccacctga
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