Sphingobium indicum UT26S: SJA_P1-00840
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Entry
SJA_P1-00840 CDS
T01201
Name
(GenBank) histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjp03032
]
SJA_P1-00840
03036 Chromosome and associated proteins [BR:
sjp03036
]
SJA_P1-00840
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_P1-00840
DNA replication proteins [BR:
sjp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SJA_P1-00840
Chromosome and associated proteins [BR:
sjp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SJA_P1-00840
DNA repair and recombination proteins [BR:
sjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SJA_P1-00840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Peptidase_C23
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BAI99036
NITE:
SJA_P1-00840
UniProt:
D4Z8V4
LinkDB
All DBs
Position
pCHQ1:63111..63386
Genome browser
AA seq
91 aa
AA seq
DB search
MNNSDLAEAVAGAHGLSKADAKKVVDTVFSTIGEAAAKGDEISLNGFGKFKVKASSERQG
RNPATGETITIKASKKLGFTPAKVIKDKLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatagcgatctagccgaggcggttgcaggcgcacacgggctcagcaaagcggac
gccaaaaaggtggtcgacaccgtcttctccacgattggcgaggctgcggcaaaaggcgat
gaaatttcgctcaacggttttggcaagttcaaggtgaaagcgtcttccgaacgccaaggt
cgcaatcccgcgaccggcgagacgatcaccatcaaggcatccaagaaacttggctttaca
cccgccaaagtcatcaaggacaagcttaacggttga
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