Sander lucioperca (pikeperch): 116060029
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Entry
116060029 CDS
T07345
Symbol
cacna2d4a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X5
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04260
Cardiac muscle contraction
sluc04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116060029 (cacna2d4a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116060029 (cacna2d4a)
04261 Adrenergic signaling in cardiomyocytes
116060029 (cacna2d4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116060029 (cacna2d4a)
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116060029 (cacna2d4a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
VWA
VWA_2
dCache_1
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
116060029
NCBI-ProteinID:
XP_031169234
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All DBs
Position
20:10938195..11027180
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AA seq
1125 aa
AA seq
DB search
MQVAAAAGMNRWSWGNCGNASKSDKSGLHRGRLMMLLWIILSSSLCLMVDGQMKLSPETV
QQWAVSFGKEIAALSTRYSGAKLLQKKYKEVEGMVKIEEVDGEELVKKFAEEMEEMLGRK
MKSVKRLAEAAEDADLYHEYNETLEFEYFNSMLINSVDEDGNSVSLGGEFPLEKNEHFDK
LPVNTQLSNIQVPTNVYNRDPAILNGAYMSEALNDVFIDNFKKDPTLTWQYFGSATGFFR
LYPGIQWIPDENGVVTFDCRNRNWYIQAATSPKDVIIVVDVSGSMKGLRLTIAKHTINTI
LDTLGENDFVNIIAYSDYVRYVEPCFKGTLVQADLDNREHFKLLIEELHVKGEGKVKKAM
KESFKILNEAAAQGQGSLCNQAIMLITDGAMEDFQDVFEEFNWPERRVRVFTYLIGREVT
FAENVKWIACNNKGYYTHVSTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDTVLP
STAKLFNSQAQSLLLMTSVAMPVFSKKKETLSHGILLGVVGTDVALKELMRLVSRYKLGV
HGYGYLLTNNGYILSHPDLRPLYKEGKKLKPKPNYNSVDLAEVEWEDTEEKLRTAMVKGE
TGTMSLDVRTSVDKGTRVMFLKNDYFYTVINETPFSLGIVLTRGYGQYIFTGNVSVEEGL
HDLMAPDLTIANEWTYCETDIDPAHRKLSQLQAVVRYLTGKEPDLECDGHLLQQTLFDAV
VTAPMEAYWTALMLNTSGMEEGVETAFLGTRSGLLRFQRYTGMEKRTAKSFLTSTDKENM
FTLDHFPVWYRRASDYPAGQFLYYMPRQETRAGRIVIATTAVTVTVGKKTAIAGAIGVQM
TLDVMESKFWAIAAQPNDTDCSDTDGVCPLRCDSFDIACYVIDNNGFVIISKQRNDAGRF
FGEVDGSVMTTLIRMGMFKRVSLFDYQAMCKMNSHSVSSARPLLSPFYGLASALKWFLSN
FLLFLLEFNICGFWHTEHFADAKPHFSLSSAHKKRGDILQPCDTEYPSFVYEPSVKETNS
IIKCGRCQKMFVVQQIPESNLLMLVVQADCDCSRQYPPLTMEPKEVKYNASVKCDRMRYQ
KIRRRPESCHAYHAQENANDCGGASIISLSASLFLTCLSFLALVS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcgcggcagctgcagggatgaaccgctggagctggggaaactgcgggaatgcc
agtaaatcggacaaaagtgggctgcacagagggaggctgatgatgctgctgtggattatc
ctctccagctcgctgtgcctgatggtcgacggccaaatgaagctttcaccagaaacggtg
cagcagtgggctgtatcctttggcaaagagatagctgccctgtccaccagatactctgga
gctaaactgctgcagaagaaatacaaggaggtcgagggtatggtgaagatagaggaggtg
gacggagaggagctagtaaaaaagtttgctgaggagatggaggagatgcttgggaggaag
atgaaatctgtgaagaggttagcggaagcagcagaggatgctgacctttaccatgagtac
aatgaaacactggagtttgaatactttaactccatgctgatcaactcggtggatgaagat
gggaattcagtgtcgctgggaggagaattccctctggagaaaaatgaacacttcgataaa
ctgccagtcaacacacaactgagtaacattcaagtccctactaatgtttacaacagagat
ccagcaattctgaacggagcctatatgtctgaggctctgaatgacgtgttcattgataac
ttcaagaaagatccaactctcacctggcagtactttggcagcgctacaggctttttcaga
ctgtacccagggatccagtggattccagatgaaaatggtgtggtcacctttgattgcaga
aacagaaactggtatatccaggcagccacttcgcctaaagatgtgataatcgtggtggat
gtcagtggcagtatgaagggactcagattgaccatagccaaacacaccatcaatacaatc
ctggatacactgggagaaaatgactttgttaacataatagcttacagtgactatgttcgc
tacgtggagccctgcttcaagggcacgctggtacaagctgatctggataacagagagcat
ttcaagctattgattgaagagcttcatgttaaaggcgagggcaaagtcaaaaaggcaatg
aaggagtctttcaagatcctcaacgaggctgcagcgcagggccagggcagcctatgtaac
caagccatcatgctgataacagacggagcaatggaggacttccaggatgtttttgaagag
ttcaactggccagaacgacgggttcgagtgttcacctatctgattggacgtgaggtgaca
tttgctgaaaatgttaaatggattgcctgcaacaacaaggggtactacacacacgtctcc
acactggctgacgtccaggaaaacgttatggaatacctccacgttctgagccggccgatg
gtcattaaccacgatcacgacatcatctggactgaggcctatatggatactgtgttacca
agcacagcaaagctgttcaacagtcaggcccaaagcctgctcctgatgacctcggtagcc
atgcctgtgttcagcaagaaaaaagagactttgtctcatgggattctgttgggagtggta
ggaactgatgtggccttgaaagaactgatgagattagtttcaagatacaagctgggtgtc
catggttacggctaccttttgaccaacaacggctacatcctgtcccaccctgacctacga
cctctgtataaagaggggaagaagctaaagccaaaacccaactataacagtgttgatctg
gcagaggtggaatgggaagacactgaggagaaactgaggacagccatggttaaaggagaa
actggaacgatgtctttagacgtgagaacttcagtggataaaggaacgagagtaatgttc
ctgaagaatgattacttctacactgtcatcaatgagacaccatttagtctgggtatagtg
ttgactagaggatatggacagtatatcttcactggaaacgtctctgttgaagagggtctc
catgacttaatggctccagacctgaccatagccaatgaatggacctactgtgagacagac
attgacccggcccaccgtaagctgagccagctgcaggctgtggtgcgatacctcactggc
aaagaaccagatctggagtgtgatgggcatttgttgcaacaaactcttttcgatgctgtg
gtcacagctcctatggaagcctactggaccgctctcatgctcaacacatctggtatggaa
gagggggtagaaacagcattcttagggacccgttcaggcctgttgagattccagagatac
actggtatggagaaaagaactgccaagtctttcctgacctccacagacaaggagaatatg
tttacattggaccatttcccagtgtggtatcgcagagcatccgactacccagctggacag
tttctgtactacatgcccagacaggaaactagagcagggaggatcgtgattgctactact
gctgtcactgttacggtgggcaagaaaactgccatcgctggagccatcggtgtccagatg
actctggatgtgatggagtccaaattctgggccattgcagcacagccaaatgacacagat
tgctctgatactgatggagtttgtcctcttcggtgtgacagctttgatatcgcatgctac
gtgattgacaataatggctttgtcataatatctaaacagcgcaatgatgcgggaagattt
tttggcgaggtcgacggatctgtgatgacaacactaatcagaatgggcatgtttaaaagg
gtgtccttgttcgactaccaggccatgtgtaagatgaactcgcactctgtcagcagcgcc
cgtccacttcttagtccgttctatggtttggcttcagccctcaagtggttcctctccaac
ttcctactgtttctcctggagtttaatatctgtggcttctggcacacggagcatttcgct
gacgccaagccacatttcagcttgtcctcagctcataagaaaagaggggacatcctgcag
ccgtgtgacaccgagtaccccagcttcgtctacgagccatcagtcaaagagaccaacagc
attattaagtgtggacgctgccagaagatgtttgtggtgcaacagatacccgagagcaac
ctgttgatgttggtggtgcaggcagactgtgactgctccagacagtacccacccctcacc
atggagcccaaagaagtgaaatataatgcctcagtgaagtgtgacaggatgaggtaccag
aagattcgccgacgccccgagtcctgccacgcctaccacgcccaggagaatgccaatgac
tgtggaggagcttctattatatctctctctgcctctctcttcctcacctgcctctccttc
ttggcacttgtctcctga
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