Saccharomycodes ludwigii: SCDLUD_001093
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Entry
SCDLUD_001093 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K14811
ATP-dependent RNA helicase DBP3 [EC:
5.6.2.7
]
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slud03009
]
SCDLUD_001093
Enzymes [BR:
slud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCDLUD_001093
Ribosome biogenesis [BR:
slud03009
]
Eukaryotic type
Pre-60S particles
Helicases
SCDLUD_001093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
UTP25
CMS1
AAA_22
Motif
Other DBs
NCBI-GeneID:
70106415
NCBI-ProteinID:
XP_045937381
LinkDB
All DBs
Position
I:complement(2518606..2520225)
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AA seq
539 aa
AA seq
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MAKDHVKDHKKRKHDNDEEVLKSSDSLEPKKKKDKKHKKDKKHKKDKKEKKDKKEKKNQE
GEKDSIKENVEEQTNNLQKKTSSTGEYVESPELSSIPQSEIDNFFTENEANVEDPLKLNF
RPLLSFDHISLEKNIQKEISKFPKPTPIQAISWPYLLNGNDVIGVAETGSGKTFAFGVPA
INRLLTFPSSSSNGSNNGIKVLVISPTRELASQTYDNLVVLTEKVGLQCCCVYGGVPKDA
QRAQLKKSQVVVATPGRLLDLIEEGCCDLSQVNYLVLDEADRMLEKGFEEDIKRIISNTP
SHGRQTLMFTATWPKEVRELASTFMNSPVKVSIGNRDELSANKRITQIVEVIAQPEKERR
LLELLKKYQSGAHKDDKVLIFALYKKEASRVERNLKYRGHNVVAIHGDLSQQQRTQALND
FKKGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQKGTAHTLFT
DLEKHLAGGLVNVLNGANQPVPEELMKFGTHTKKKEHSAYGAFFKNVDLSKKPKKITFD
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatcacgtaaaggaccataagaagagaaaacatgacaatgatgaagaagtt
cttaaatccagcgatagtttagaaccaaagaaaaagaaggataaaaaacacaagaaggac
aaaaaacacaagaaagacaaaaaagaaaagaaagataaaaaggaaaagaaaaatcaagaa
ggagaaaaagactcaataaaagagaatgtcgaagaacaaactaataatttgcaaaaaaaa
acttcttctactggtgaatatgttgaaagtcctgagttgtcctctattccacaatctgaa
atagataatttcttcacagaaaatgaagctaatgtggaagacccattaaagttgaatttc
cgtccattgctgtcgtttgatcatatttccttggagaaaaatattcaaaaagagatttct
aaatttccgaaaccaacacctatccaagctatttcttggccatatttattaaatggtaac
gatgttattggtgttgctgagacaggtagcggtaaaacttttgcttttggtgttccagct
attaacaggttattaactttcccctcttcttcttctaatggtagtaataatgggatcaag
gtactagttatttcacctaccagggaattagcttctcaaacttatgataatttagttgta
ttaactgaaaaagttgggttacaatgctgctgtgtttatggaggtgttccaaaagatgct
caaagagctcaactaaaaaaatcgcaggttgtagttgctacaccaggtagattattagat
ttgatcgaggaaggttgttgtgatttgtctcaagtcaattacctagtgctggatgaggct
gatagaatgctagaaaaaggttttgaagaagatattaagagaattattagcaatacacca
tcacacggtcgccaaactttaatgtttactgcaacctggcccaaagaagtcagagaatta
gcttcgacatttatgaattccccagtcaaagtttctattggtaatagagatgaattaagc
gccaacaaaagaattactcaaatagttgaagttattgcgcaaccagaaaaggaaagaagg
ttacttgaattattgaaaaagtaccaatccggcgctcacaaggacgataaagttttaatt
tttgctctttataaaaaggaagcctcacgtgttgaaagaaacttgaaatacaggggtcat
aatgtagttgctattcacggtgatttatctcaacagcaaagaactcaagcattgaacgat
tttaaaaaggggaaatcaaatttgttattggctactgacgttgcagctagaggtttagat
atccctaacgttaagactgttattaatttaactttcccactaacagttgaggattatgtc
caccgtattggcagaacaggcagagctggtcaaaaaggtactgctcataccttatttacc
gatttagaaaagcatctggctggtggattggttaatgtgttgaatggtgctaatcaacca
gttccggaggagttaatgaaatttggtactcataccaaaaagaaggaacatagtgcttat
ggtgcattttttaaaaatgttgatttatcaaagaaacctaagaagatcacttttgattaa
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