Silurus meridionalis (southern catfish): 124380071 Help Entry 124380071         CDS       T08004                                  Symbol acana Name (RefSeq) aggrecan core protein isoform X1   KO K06792   aggrecan 1 Organism smeo  Silurus meridionalis (southern catfish) Brite KEGG Orthology (KO) [BR:smeo00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:smeo00535]     124380071 (acana)    00536 Glycosaminoglycan binding proteins [BR:smeo00536]     124380071 (acana)    04091 Lectins [BR:smeo04091]     124380071 (acana) Proteoglycans [BR:smeo00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    124380071 (acana) Glycosaminoglycan binding proteins [BR:smeo00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    124380071 (acana) Lectins [BR:smeo04091]  C-Type lectins   Group 1: Proteoglycan core proteins    124380071 (acana) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi EGF V-set hEGF EGF_3 Motif Other DBs NCBI-GeneID:  124380071 NCBI-ProteinID:  XP_046696728 LinkDB All DBs Position 26:complement(3816376..3838105) Genome browser AA seq 1734 aa AA seqDB search MTSLLLLCLCLRVISAKWIIPDYSYTEPEKTLSVSIPIADPLQPLMGDTVVLPCYFQDDT VDDPGAPTISPLSYRIKWSIVTEEKTTDILVAMEGHVVVNNKYTDRVQMVAYPTSLNDAT IKITQLLSNESGMYRCEVMHGIEDSSASINVQVQGIVFHYRAITSRYTLTFEKAKAACIQ NSAVIATPEQLQAEYDTGYHQCDAGWLSDQTVRYPIHEPREACYGDKFEFPGVRTYGVRD VNETYDVYCFAEKMSGRVFYSKSYKKFTFDEAQDQCAKLGAKLATTGQLYLAWKAGMDEC NAGWLADRSVRYPINIARPQCGGGLLGVRTVYRFVNQTGYPPPESKYDAICYTDEEEEGS TLFDHTIPDILTTEATSEVISVDMGTSGPPVFIPQTSPGSELIGVVETHKPPTTTADLLY VEQEITQLPLSSPPSIIDGFIAVTAQPLEHPVSFTGIVFHYRLRQSRYAFTFADAQLACQ DIGAVIASPQQLQAAYEAGYHHCDAGWLADQTVRYPIVHTRERCTGDLEHLPGVRSYGVQ SADEHYDVYCYMDKPRGNVFHVSSSGGFTYDEAVASCQSQNASLASTADLYVAWKLGFDK CRPGWLIDRSVRYPINNPRPQCGGGKHGVHTVFKFPNQTEYPDLHSKFDAYCLQVDLQLN LYENEYNMTHIEEDLVNLTTITDLSMAVNHTFTSSIPMDISGSGSAGLPSGGSGFSGDVS ASGSEEQPSGSSDLGRELSGSGLPSGSSGFSGELSGSGLPSGSSGFSGDLTGSGFPSGSS GFSGEPSGSGLPSGSSGIGGEFSGSGLPSGSSGFSGELSGSGLPSGSSGIGGELSGSGLS SGSSGFGGEFSGSGLSSGSSGFGGELSGSGLPSGSSGFGGELSGSGLPSGSSGFGRELSG SGLPSGSSGFGGELSGSGLPSGSSGFGGELSGSGLPSGSSGFGGELSGSGLPSGSSGFGG ELSGSGLPSGASGLGGELSGSGWPSGFSGLGGELLGSGLPSEFSGLEEISGSGLPSASSG LEGEPSGSVLPSRFSGLGGEFSGFELPSGSSAIGCDFSGSGQSGDMSGSGLSDLGISVTF SGKDTIISGDGSASGTPQEAGEGSTEILTFMSGLGSGFFSGDGDGSGSGSGSSFGSGESG STTDIFSIFGESSRGETSGISSGLDSSGEFSGFSGLPSGVMSSGDDSGFSGISGSGIMMV KGQWMDVSTASTLTAQELGGSQMYFSGSGAQQGSGSSGSGVSGSADLSGSGSGSGFPDIT FLKSGLTDLIDLYSTEQEASGTLTYGSGEGSGDFDEVSGLSSGDTSEASASGEIISFTDE SLVEVPSKSTQNQELRKGPVEHSGRESELSLSSGHHYTTMSTEEHHPTSIPSEDQVHLTD EPTVQVPSGLLSNSELPQEILSNAAKSSWNYNSVTPTSTTGTTTDPAFSMQTPTVIEIPA IEKAAVDPCHPNPCGAAACSVQDGVGVCHCPPGVPAEECHFEVDVCHSNPCANGATCVEV QDAFKCLCLPSYGGDRCEIDTETCEEGWTKFQGNCYLHFSERTMWEEAEQHCRSLGAHLV SITNPEEQAFVNGNAQDYQWIGLNDKTLQNDFQWTDGTPMQYENWRPNQPDNYFNSGEDC VVMIWHEYGQWNDVPCNYHLPFTCKIGPVTCGQPPEVKNARWFGTKKERYQVNSIIRYQC HDGFRQRHPPVVRCMADGHWQEPKVECIPQTKRRLLKRSIRRQSVKRSSLRKHL NT seq 5205 nt NT seq  +upstreamnt  +downstreamnt atgacatctttgctgttactttgcttgtgtcttcgggtaatctcagcaaaatggatcatt ccagactactcatatacagaaccagaaaaaactctaagcgttagcattcccattgctgac cctcttcaacccttaatgggtgatacagtggttttgccctgttacttccaggatgacaca gtggatgacccaggtgctcccaccatatcccctttgtcttatcgcatcaaatggagcata gtcaccgaagagaagaccacagacattttggtggccatggaaggtcatgtggtagtgaat aataagtacacagatagagttcaaatggtggcataccccaccagtttaaatgatgccacc attaaaatcacacagcttctttcgaatgaatcgggaatgtatcgctgtgaagtcatgcat ggaatcgaagacagtagtgcttctattaatgtccaagtgcaaggcattgtgttccactac cgtgccattacttcacgttacaccctgacgttcgagaaggcaaaggcggcctgtattcag aatagtgctgtgattgccacaccagagcagctacaggcagaatatgatacaggataccac cagtgtgatgccggctggctttctgaccagactgttaggtatcctatccacgaaccccga gaggcctgctatggcgacaagtttgaattcccaggagtgagaacgtatggagtaagagat gtaaacgagacctatgatgtgtattgctttgcggagaagatgtcagggagggtattctat tcaaaatcctataaaaagttcacctttgatgaagctcaggatcagtgtgctaagctgggt gctaaattagccacaactggtcagctgtatctggcctggaaggctggtatggatgaatgc aatgcaggctggctggcagacaggagtgtccgttatcccatcaacattgcccgaccccag tgtggaggaggtcttcttggagtgcgtacagtgtaccgcttcgttaatcagaccggctat cctccaccagaatcaaaatatgacgctatctgttacacagatgaagaagaagagggctca accttattcgaccatacaattccagatatactgactacagaggctacaagtgaggtaata agtgtggatatggggacaagcggcccacccgtatttattccgcagacctcacctgggagt gagctaattggcgtggttgaaacccacaaaccccccaccacaactgctgacctcctgtat gtagaacaggaaatcacacagctgcctttgtcttcaccacccagcatcattgatggcttt attgcggtgactgcacagccattagagcatccagtgtcctttactggtattgtcttccac tacaggctacgccagagtcgctatgctttcacatttgccgacgctcagttagcctgccag gatattggtgcagtgattgctagtcctcagcagttacaggctgcctatgaagcaggctat caccattgtgatgcaggctggctggctgaccagactgttaggtatcctattgtacataca cgagagagatgcactggtgatttggaacatttgcctggtgtgaggtcttacggtgtacaa tctgctgatgagcactatgatgtatactgttacatggacaaaccaagagggaatgttttt catgtgagttcctctgggggtttcacatatgatgaagcagtggcttcttgccagtcccag aatgcctccttggcctccacagctgatctgtatgtggcctggaaactaggctttgataag tgtcgtcctggctggctcatcgaccgcagtgtccgctatcccattaataatccaagacct cagtgtggaggagggaagcatggagttcatactgtcttcaagtttcccaaccagactgaa tatcctgatcttcactccaaatttgatgcctactgcttgcaagttgatctccaattaaat ttgtatgagaatgaatataatatgacacatattgaagaggacttggtgaacctgaccaca ataactgatctttccatggctgtgaaccacaccttcacttcatccattcccatggacatc tctggttctggttctgcaggcctgccatctgggggcagtggtttttctggtgatgtatca gctagtggaagtgaggagcagcctagtgggtcatcagatttaggaagagaactttcagga tctggacttccatctgggtcctcaggttttagtggagaactttcaggatctggacttcca tctgggtcttcaggttttagtggagaccttacaggatctggatttccatctgggtcttca ggttttagtggagaaccttcaggatctggacttccgtctgggtcttcgggtattggagga gaattttcaggatctggactgccatctgggtcttcaggttttagtggagaactttcagga tctggacttccgtctgggtcttcgggtattggaggagaactttcaggatctggactgtca tctgggtcttcaggctttggaggagaattttcaggatctggactgtcatctgggtcttca ggttttggaggggaactttcaggatctggactgccatctgggtcttcaggttttggaggg gaactttcgggatctggactgccatctgggtcttcaggttttggaagagaactttcggga tctggactgccatctgggtcttcaggttttggaggggaactttcaggatctggacttcca tctgggtcttcaggttttggaggggaactttcaggatctggacttccatctgggtcttca ggttttggaggggaactttcgggatctggactgccatctgggtcttcaggttttggaggg gaactttcaggatctggactgccatctggagcttcaggcttaggaggagaactttcagga tctggatggccatctgggttttcaggtttaggaggagaacttttaggatctgggctgcca tctgaattttcaggtttagaagaaatttcaggatctggactgccatctgcatcctctggt ttagaaggagaaccttcaggatctgtactgccaagtaggttttcaggtttaggaggagaa ttttcaggatttgaactgccaagtggttcatcagccataggatgtgatttttcaggatct gggcaaagcggagacatgtctggctcaggccttagtgatttaggcataagtgtgactttc tcaggaaaagacacaataatttctggtgatggatcagcttcagggacacctcaggaagct ggggagggcagtacagagatcctcactttcatgtcaggtcttggttctggcttcttcagt ggggatggggatgggtctgggtcaggaagtggttcaagttttggttcaggggagagtggg tctacgacagatatatttagcatttttggagaaagcagtagaggggaaacctctgggatt tcttcaggtcttgattctagtggggaattctctggattcagtggtttgccatcaggtgta atgtcttctggagatgatagtggtttctctggaattagtggcagtggaataatgatggtg aaaggccagtggatggacgtatccactgcttcaacccttacagctcaagagctgggtggt agtcaaatgtatttcagtggctctggagctcaacaggggtctggttcaagtggctccggt gtgagtggaagtgctgatttaagcggctctggaagtggttcaggatttcctgacatcacc tttttaaagtcaggtcttactgatctcatagacctatacagtacagaacaagaagcctct ggaactttgacatatggatcaggagaagggagcggtgatttcgatgaagtctctggtctt tcatcaggggacacatctgaagcatcagctagtggagaaattatttcatttactgatgag agcttggtggaagttccttcaaagtccacgcaaaaccaggagctcagaaaaggaccggtc gagcacagcgggagagagagtgaactatctttgagtagtgggcaccactatactactatg tcaacagaagaacaccatcccacatccatccctagtgaagatcaggttcatttaactgat gagccaacagttcaagttccctcagggctgcttagtaacagtgaactgccacaggaaatc ttgtcgaatgctgctaaatcctcctggaattataattctgtgactccaacatctacgacc ggcaccactaccgaccctgccttttcaatgcagactccgactgtcatagagatcccagcc atcgagaaagctgctgtggacccatgtcatccaaatccctgtggtgctgctgcgtgttct gtgcaggacggggttggcgtatgccactgtccacctggggtgccggcggaagagtgccac tttgaggttgatgtgtgccattcaaacccttgtgccaatggagctacgtgtgtggaggta caggatgctttcaaatgcttatgcctgcccagctatggaggggatcgctgtgagatcgac acagaaacatgtgaggagggctggactaagtttcagggtaactgttacttacacttctct gagagaaccatgtgggaggaggctgaacaacactgccgaagtcttggagctcacctggtc agcatcaccaacccggaggaacaagcatttgttaacggcaatgcacaggattaccaatgg atcggcctaaatgataagactttacaaaatgacttccagtggacagatggaaccccaatg caatatgagaactggaggcctaatcagccagataattatttcaattctggtgaggattgt gtggtaatgatctggcatgaatacggtcagtggaatgacgtaccttgcaactaccatcta ccattcacatgcaaaattggcccagtaacatgtggccagcctcctgaagtgaagaatgct cggtggtttgggactaagaaggagcgctatcaggtcaactcaataattagatatcagtgc catgatggcttcaggcagcgccatccacctgtggtccgctgcatggcagatggacactgg caagagccaaaggtggaatgcataccccaaaccaaaagaagactactgaagagatccatt aggcgccaatctgttaagaggtcatcattgaggaagcacctctaa

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