Silurus meridionalis (southern catfish): 124399979
Help
Entry
124399979 CDS
T08004
Symbol
sgpl1
Name
(RefSeq) LOW QUALITY PROTEIN: sphingosine-1-phosphate lyase 1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00600
Sphingolipid metabolism
smeo01100
Metabolic pathways
Module
smeo_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
124399979 (sgpl1)
Enzymes [BR:
smeo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
124399979 (sgpl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
SepSecS
BLH_phosphatase
Motif
Other DBs
NCBI-GeneID:
124399979
NCBI-ProteinID:
XP_046727347
LinkDB
All DBs
Position
2:complement(14735949..14750326)
Genome browser
AA seq
572 aa
AA seq
DB search
MDYSSALEVYKEMMLLYFEEFKQYINSLCADLEPWQIITSTLVCTLAAVWLKGFLFQRES
LMSRTKKQCFRIIRKIPFVGTSIQNQLNKALDDMSMSLCTLKKEXSYAKHLPAQGLTQKQ
VLDSIKQYQTLNEVKWSKGKVSGTVYWGDEKLTDLLVKVYGEFAWSNPLHPDIFPGVRKM
EAEVVRMTCSLFSGGPESCGTVTSGGTESILMACKAYRDLAYERGIKYPEIIAPVSAHAA
FDKAAHYFGMKLIHIPLDKKTMKVDVKAMKRAISKNTAMLVCSAPQFPHGIIDPIVEVGK
LAEKYNIPLHVDACLGGFLIVFMEKAGFKLDPFDFRVKSVTSISADTHKYGYAPKGSSVV
IYRDKKYRHYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMHMGESGYVEATKKVV
QTARIIAAGICKVEGLFVFGNPEVSVVALGSDVFDIFRLSNALTSKGWNLNTLQFPSSIH
ICVTMLHTQPGVAQEFIKDVKEEVAIIMQNPKEKTTGMGAIYGMAQSIPDRSMVTEVSCG
FLDCLYSTEVKYVQKKHYTSKKNHINGNSTTY
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggactactcgagtgctttggaggtgtataaggagatgatgctgttgtattttgaggag
tttaagcaatacattaactcactgtgtgctgatttggagccatggcagatcatcacatca
acattggtgtgtacgcttgctgcagtgtggctcaaaggatttctgtttcagagggagagt
ctgatgtctagaaccaagaagcagtgttttcgaatcatcagaaaaatcccatttgttggc
acatcaattcagaaccagctgaacaaggctctggatgacatgtcaatgagcctctgcaca
ctgaagaaggaantgagctacgcaaagcacctcccagcacagggccttacacagaaacaa
gtcctagacagcatcaaacaataccagacactgaatgaagtaaagtggtccaaaggcaag
gtttcaggcacagtctactggggagatgaaaagcttacagatcttctagtgaaggtgtat
ggtgagtttgcttggagtaatcccctccacccagatatctttcctggagttagaaagatg
gaagcagaggtggtgcggatgacgtgttctctcttcagtggtggacctgagtcatgtggc
acagtcacctctggtggaactgagagcattttgatggcctgtaaggcatacagagatttg
gcttatgagcgaggaatcaaatatccagagataattgcaccagtaagtgcccatgcagca
tttgacaaggcagcacactactttggaatgaaactgattcatatacctttggataagaag
accatgaaagtcgatgtgaaggccatgaagagagccatctctaagaacacagccatgcta
gtgtgctctgctcctcagtttcctcatgggatcatagaccccattgtggaagtaggaaag
ttggcagaaaagtacaacattcccttacatgtggatgcctgcttaggtggcttccttata
gtgttcatggaaaaggctgggtttaagctggatccatttgacttccgagttaaaagcgtc
acaagcatttcggcagatacgcataagtacggttatgcacctaaaggctcctcagtggtg
atctacagagacaagaaatatcgccactatcagtactttgtagcccctgattggcaggga
ggaatttatgcatctccctcagtagctggttctcggcctggtggtatcatcgctgcctgc
tgggccaccatgatgcatatgggagagagtggctacgtggaggccaccaaaaaggttgtt
caaacagcccgcatcattgcagcaggcatctgcaaagtggagggactgtttgtgttcgga
aacccagaagtctcagtagtggccttgggctccgatgtatttgatattttccgtctatcc
aatgcactcacatcaaagggatggaatctcaatactctccagttcccatctagcatccat
atttgtgtaactatgctgcacacacaacctggtgttgcacaggagttcatcaaagatgta
aaggaagaagtagcaataatcatgcagaacccaaaggagaagaccactggaatgggagca
atctatggcatggcccagtccatccctgatcggtcaatggtgacagaggtatcatgcggc
ttcctggactgcctctacagcactgaagttaaatacgtccaaaaaaaacattacaccagc
aagaagaaccacataaatgggaactctacaacctactga
DBGET
integrated database retrieval system
