Shinella oryzae: K6301_03495
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Entry
K6301_03495 CDS
T08112
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soj03400
]
K6301_03495
DNA repair and recombination proteins [BR:
soj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
K6301_03495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
FtsK_SpoIIIE
ResIII
AAA_10
AAA_30
Zot
T2SSE
AAA_16
TrwB_AAD_bind
AAA_18
DUF5852
AAA_19
Hydrolase
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UPA26203
LinkDB
All DBs
Position
complement(718532..720097)
Genome browser
AA seq
521 aa
AA seq
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MLQDGKLYIGTSRKPDDTNNKPEYLELKFGNRHGLVTGATGTGKTVTLQILAEGFSNAGV
PVFCADVKGDLSGIGAMGEPKDFLQKRADQIGLTPYEFQEFPVIFWDLYGEKGHRVRTTI
SEMGPLLLSRLMNATDAQEGVINIAFKIADQGGLPLLDLKDFQALLNYMGENASTLSNQF
GFISKASVGSIQRELLILEQQGAAQFFGEPALKISDIMRTTNDGRGAISVLAADKLMMNP
RLYGTFLLWMLSELFEVLPEVGDPDKPKLVFFFDEAHLLFNDAPKVLIERVEQVVRLIRS
KGVGVYFVTQNPLDVPETVLAQLGNRVQHALRAYTPREQKAVKTAADTFRPNPDFNCAEV
ITNLGTGEALVSTLEGKGAPSMVERTLVRPPASRLGPVTDAERQAIMKVSPVAGLYDEDF
DRESAYEILTARAKKAADAAAAQQQAEADQASQQSSGGSRWTLPGFGDEEPTATSAPKQA
KPRAGYQRETVAEAAMKSVARTVASSLGRALVRGILGSLRR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
attcttcaggacggaaaactctatatcggcaccagccgcaaacccgacgataccaacaac
aagccggaatatctcgagctgaagttcggcaaccgccacggcctcgtgacgggcgcgacc
ggcacgggcaagaccgtgacgctgcagatcctcgcggaagggttttccaatgccggcgtg
ccggtgttctgcgccgacgtgaagggcgacctctcgggcatcggcgcgatgggcgagccg
aaggatttcctccagaagcgcgccgaccagatcgggctcacgccctacgaattccaggaa
ttccccgtgatcttctgggatctctacggcgagaagggccaccgcgtccgcaccaccatc
tccgaaatgggcccgcttctgctctcgcggctgatgaacgcgacggatgcgcaggaaggt
gtgatcaacatcgccttcaagatcgccgaccagggcggcctgccgctgctcgacctcaag
gatttccaggcgctgctcaactatatgggcgagaacgcctcgacgctttccaaccagttc
ggcttcatctccaaggcctcggtcggctcgatccagcgcgaactgctgatcctcgaacag
cagggcgccgctcagttcttcggcgaacccgcgctgaagatttccgacatcatgcgcacc
accaatgacgggcgcggcgcgatctcggtgctggccgccgacaagctgatgatgaatccg
cgtctctacggcaccttcctgctctggatgctgtcagagctcttcgaggtgctgccggaa
gtgggcgatcccgacaagccgaagctggtgttcttcttcgacgaggcccatctcctgttc
aacgatgcgccgaaggtgctgatcgagcgggtggagcaggtcgtgcgcctcatccgctcc
aagggcgtaggcgtctatttcgtcacgcagaacccgctggacgtgcccgaaacggtgctc
gcccagctcggcaaccgcgtgcagcatgcgttgcgcgcctatacgccgcgcgagcagaag
gcggtgaagaccgccgccgacacattccgccccaacccggatttcaactgcgccgaggtc
atcaccaatctcggcaccggcgaggcgctggtctcgacgctggagggcaagggcgcgccg
tccatggtggaacgcacgctggtgcgcccgccggcctcgcggcttggccccgtcacggat
gcggagcgtcaggcgatcatgaaggtgagccccgtcgccggactttatgacgaggatttc
gaccgcgagtcggcctatgaaatcctgacggcgcgggccaagaaggcggccgatgccgcc
gccgcgcagcagcaggcggaggccgaccaggccagtcagcaatcctccggcggcagccgc
tggaccctgcccggcttcggcgacgaggagcccactgccacctccgcgcccaagcaggcc
aagccccgtgcgggctaccagcgcgagacggtcgcggaagcggcaatgaaatccgtggca
cgcaccgtggcctcctcccttggccgcgcgctggtgcgcggcatcctggggagcttgcgg
cggtag
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