Schaalia odontolytica: FBF35_03955
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Entry
FBF35_03955 CDS
T05977
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
soo
Schaalia odontolytica
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_03955
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FBF35_03955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
TrwB_AAD_bind
Zot
ResIII
AAA_10
AAA_16
CbiA
nSTAND3
SRP54
AAA_19
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QCT35246
LinkDB
All DBs
Position
complement(905448..907427)
Genome browser
AA seq
659 aa
AA seq
DB search
MSENIEDLKAQLAAAEAAAKAAEAEAARAKAEALRLQLEAKGGSAADAPAATAEAETQQA
EAARATADALRTQVEAAEAAPAPEAPAAEAPAAPASSPAPSTELSAFATQIQGAYSWDVP
AVTIGTLIDNGARVPGVSAKMPLPMFNRHLLVAGATGTGKTRTLQLLAEGLSANGSSVLL
CDVKGDLTGLAEAGASSEKLLSRTAANGQDWASSSFPIELLSLGGADSQFPGVPVRAQIS
DFGPILLARALALNTTQEQALQLIFAWADGQGLELIDLPDLRAVISFLTSDEGKDELATI
GGVSKATAGVILRALTALESQGGGQFFGAPGFDTADLMRMDSTGRGIISLLGVGDISTRP
ALVSAVIMFLLANLFSTLPEVGDVERPKLVFFFDEAHLLFADATKEFERQVVQTVRLIRS
KGVGVVFVTQTPKDIPSDVLAQLGSRIQHGLRASTPDDFKKLKATVQTFPKTSLELDEVL
TTLGTGEAVVTVLDPKGNPTPVTPVGIWAPASVMGPASADTVARINQSSVIMGRYRDAVN
PDSAEEKLERRAADAQAAREEAIAQEEAAREAERLQKEAEKEAERAAKEAEKAAAKEEAA
RQKEMEKLRRQVEKQQEKEEAARQRAAERRTRQVENVLGSVLRTAGREITRSIFGTRKR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaacatcgaggacctcaaggcgcagctcgccgcggcggaagcagccgcgaag
gccgccgaggctgaggccgcccgcgcaaaggccgaagccctgcgtctccagcttgaagca
aagggcggctcggccgcagacgcgcctgccgccacggccgaggccgagacccagcaggcg
gaagccgcccgcgcgacggccgacgcgctgcgcacccaggtggaggccgccgaggccgcc
cccgcacccgaggcccccgccgccgaagcgcctgccgccccggcctcgtcccccgccccc
agcaccgaactgtcggctttcgccacccagatccagggcgcctactcctgggacgtcccc
gcggtcacgatcggcaccctgattgacaacggtgcgcgcgtgcccggcgtgagcgccaag
atgccgctgcccatgttcaaccgccacctcctggtcgccggagcgacgggcacgggcaag
acccgtaccctccagctcctggccgagggcctgtccgcgaacggctcctccgtcctcctg
tgcgacgtcaagggcgacctgaccggcctggccgaggccggcgccagctccgagaagctc
ctgagccgcaccgcggccaacggtcaggactgggcgtcctcctcgttcccgatcgagctg
ctgagcctgggtggcgcggattcgcagttcccgggcgtgcccgtgcgcgcccagatctcc
gacttcggcccgatcctgctcgcccgcgcgctcgccctcaacaccacgcaggagcaggcc
ctccagttgatcttcgcgtgggcggacggccagggcctcgagctcatcgaccttcccgac
ctgcgcgccgtcatctccttcctgacctcggatgagggcaaggacgagctggccacgatc
ggcggcgtctccaaggccaccgccggcgtcatcctgcgcgccctgaccgcgctcgagtcc
cagggcggcggccagttcttcggtgcccccggcttcgacacggccgacctcatgcgtatg
gattcgaccggccgcggcatcatctccctgctcggcgtcggcgatatctctacgcgcccg
gcgctggtcagcgccgtcatcatgttcctgctcgccaacctcttctccaccctgcccgag
gtcggcgacgtcgagcgccccaagctggtgttcttcttcgacgaggcgcaccttttgttt
gcggacgccaccaaggagttcgagcgtcaggtcgtccagaccgtgcgactcatccgctcc
aagggcgtgggcgtcgtcttcgtgacgcagacccccaaggacatcccctctgacgtcctg
gcccagctcggttcgcgtatccagcacggcctgcgtgcctccaccccggacgatttcaag
aagctcaaggccacggtccagaccttcccgaagacctccctggagctcgacgaggtcctc
accaccctgggcaccggcgaggccgtcgtgaccgtcctggatccgaagggtaaccccacc
ccggtcacgccggtcggcatctgggcgcccgcctccgtcatgggccccgcgtccgctgac
acggtcgcgcgcatcaaccagtccagcgtcatcatgggccgctaccgcgacgccgtgaac
ccggactccgccgaggagaagctcgagcgccgcgcggccgatgcacaggccgcccgcgag
gaagccatcgcccaggaagaggccgcgagggaggccgaacgcctgcaaaaggaggccgag
aaggaagccgagcgcgccgccaaggaggccgagaaggccgccgcaaaggaagaggctgct
cgccagaaggaaatggagaagctgcgccgccaggtcgaaaagcagcaggagaaggaggag
gccgcccgccagcgcgccgccgaacgccgtacccgccaggtcgaaaacgtcctcgggtcc
gtcctgcgcaccgccggccgcgagatcactcgctccatcttcggcacccgcaagcgctga
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