Spathaspora passalidarum: SPAPADRAFT_50932
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Entry
SPAPADRAFT_50932 CDS
T03101
Name
(RefSeq) ATP-dependent RNA helicase DBP3
KO
K14811
ATP-dependent RNA helicase DBP3 [EC:
5.6.2.7
]
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaa03009
]
SPAPADRAFT_50932
Enzymes [BR:
spaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPAPADRAFT_50932
Ribosome biogenesis [BR:
spaa03009
]
Eukaryotic type
Pre-60S particles
Helicases
SPAPADRAFT_50932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
UTP25
CMS1
AAA_22
Tfb4
Motif
Other DBs
NCBI-GeneID:
18871501
NCBI-ProteinID:
XP_007375647
JGI:
50932
UniProt:
G3AMV7
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAKDQKDKKRKYEEDGEDVAERDVKLSKSEKKEKKEKKDKKDKKDKKDKKDKKDKKDKKD
KKDKKDKKEKKEKKDKKDKKEKKDKKEKKEKKSKVTTTISGEAQASVGYTQSSTLTDLPQ
SEIDSFLATNEVTIEDPFNLNLRPLLSFSQIELNEKIQKVISKFPKPTPIQSVAWPYLLS
GKDVIGVAETGSGKTFAFGVPAINNIITLNKTGLRVLCISPTRELALQIYDNLVDLTANT
SINCVAIYGGVSKDDQIKKLRNANVVVATPGRLLDLINDGAVDLSDIDYLVLDEADRMLE
KGFEEDIKAIIGNTKAESRQTLMFTATWPKEVRELANTFMKTPAKVSIGDRDELSANKRI
TQIVEVVQRFDKEKILLNLLRKYQSGSHKDDKILIFALYKKEAGRIEMLLKRNNYRVAAI
HGDLSQQQRTQALGAFKSGESSLLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGR
TGRAGQTGIAHTLFTEEEKHLSGALCNVLRSANQPVPDELLKFGGHTKKKTHNAYGAFFK
DVDMTKKATKIKFD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatcaaaaggataagaagagaaagtacgaagaagatggtgaagatgttgct
gaaagagatgtcaagttgagcaagtctgaaaagaaagaaaagaaagagaagaaggacaag
aaggacaagaaggacaagaaggacaagaaggacaagaaggacaagaaggacaagaaggac
aagaaggacaagaaggacaagaaggaaaagaaggaaaagaaggacaagaaggataagaaa
gaaaagaaggataagaaagaaaagaaggaaaagaagagtaaagtaaccaccactatcagt
ggagaagctcaagcctcggtaggttacactcaatcatccactttaactgacttaccgcaa
tccgaaatcgactcctttttagccactaatgaagtcaccattgaagacccattcaactta
aatctcagaccattattatcgttttctcaaattgaattgaatgaaaaaatacagaaagtt
atttccaaattccctaagccaacccctattcaatccgttgcttggccatacttattgagt
ggtaaagatgttattggtgttgctgaaactggttcaggtaagacctttgcctttggtgtt
ccagctatcaacaacatcatcacattaaataaaactggattaagagtattatgtatctca
ccaaccagagaattggcattacaaatctatgacaatttagttgacttgactgcaaatacc
tcaattaactgtgttgcaatctatggtggtgtttccaaggatgaccaaatcaagaagtta
cgtaatgccaatgttgtcgttgcaactccaggtagattattagacttaatcaatgatgga
gctgttgatttgagtgacatcgattacttggtcttggatgaagctgatagaatgttggaa
aaggggtttgaagaagatatcaaagcaatcattggtaataccaaggccgaatccagacaa
actttgatgtttactgctacctggcccaaggaagttagagaattggccaatacattcatg
aagaccccagctaaagtaagtattggtgatcgtgatgaattaagtgctaacaagagaatt
actcaaattgtcgaagttgttcaaagatttgacaaggaaaagatcttgttgaacttgtta
cgtaaatatcaatctggtagtcataaagatgacaagatcttaatctttgcattatacaaa
aaggaagctggaagaatagaaatgttattaaagagaaataactatcgcgttgctgcaatc
cacggagatttatctcaacaacaaagaacccaagctttgggtgcttttaaatctggagaa
tcaagtttattattagctactgatgttgctgctagagggttagatattcctaacgttaag
gttgttatcaacttgacattccccttaactgttgaagattatgtgcatagaattggtaga
actggtagagcaggtcaaaccggtattgctcatactttattcactgaagaagaaaagcat
ttgagtggtgcattatgtaatgttttaagatcagctaatcaacctgtgcctgatgaatta
ttgaaattcggtggtcataccaagaaaaagacccataatgcttatggtgcattctttaaa
gatgttgacatgaccaaaaaggccaccaaaattaagtttgattaa
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