Serratia plymuthica 4Rx13: SOD_c16280
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Entry
SOD_c16280 CDS
T02710
Symbol
rlmI
Name
(GenBank) ribosomal RNA large subunit methyltransferase I
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srl03009
]
SOD_c16280 (rlmI)
Enzymes [BR:
srl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
SOD_c16280 (rlmI)
Ribosome biogenesis [BR:
srl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SOD_c16280 (rlmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_25
Met_10
PrmA
Methyltransf_15
TRM
Methyltransf_11
Methyltransf_10
Methyltransf_12
Methyltr_RsmB-F
PUA
Motif
Other DBs
NCBI-ProteinID:
AGO54613
LinkDB
All DBs
Position
complement(1794952..1796142)
Genome browser
AA seq
396 aa
AA seq
DB search
MTVRLYLAKGREKSLLRRHPWVFSGAVQRIEGKALSGETIDIHDAQGKWLARGAYSPESQ
IRARVWTFQQDEEINIDFFIRRLQQAQNWRDWLAKRDGLDGYRLIAGESDGMPGVTIDRF
QNFLVLQLLSAGAEYQRAALITALQHCYPECAIYDRSDVAVRKKEGLPLAQGPVLGDLPP
ALLPITEHGMKLLVDIQQGHKTGFYLDQRDSRLAARNYSAGRRVLNCFSYTGAFAVSALM
GGCSQVISVDTSQAALDIAKQNVELNQLDLSKAEFVRDDVFQLLRAYRTQGEKFDLIIMD
PPKFVENKNQLASACRGYKDINMLALQLLNPGGILLSFSCSGLMPTDLFQKILADAAVDA
GRDVQFIEQYRQAADHPVIATYPEGLYLKGFACRVM
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacgcctgtatctcgccaaaggacgtgaaaagtccttacttcgtcgccacccg
tgggtattctccggtgccgttcaacgtattgagggtaaagctctttccggcgaaaccatt
gatattcacgacgcccagggcaaatggttggcgcgcggcgcctactcgccggagtcccaa
atccgcgcccgtgtctggaccttccagcaggacgaagagattaacatcgatttcttcatt
cgccgtttacagcaggcacaaaactggcgtgattggttagcgaaacgtgatggactggac
ggctatcgcctgattgccggcgaatctgacggtatgccaggtgtgaccatcgatcgcttc
cagaatttcctggtcttgcaactgctgtcagccggcgccgaataccaacgcgcggcgctg
attaccgccttgcagcattgctatccagaatgcgctatctacgatcgttcagacgtagcg
gtgcgcaaaaaagaaggtttgccgttggctcaggggccggtgctgggcgatcttccccct
gctctgctgcccattaccgagcatggcatgaagctgttggtggatatccaacaaggccac
aagaccggcttttacctcgatcagcgcgacagtcgcctggctgcacgtaattactccgcc
ggccgccgcgtactcaactgcttctcctacaccggcgccttcgccgtttcggccctgatg
ggcggctgttcacaggtgatcagcgtagatacatcacaagcagcgttggatatcgctaaa
cagaacgtcgaactgaaccagttggacctgagcaaagcggagtttgtgcgcgatgatgtg
ttccagttgctacgcgcctaccgcacgcagggtgaaaaattcgacctgatcattatggat
ccgccgaagttcgtcgaaaacaaaaaccagctggccagcgcctgccgcggttataaagat
atcaatatgctggcgttgcagttgctgaatccgggcggcattttgctcagtttctcctgc
tccggcctgatgcctaccgatttgttccagaaaattttggccgacgccgctgtagatgcc
gggcgtgatgtacaatttatagagcagtaccgtcaggctgccgatcacccggttatcgca
acttatcctgaagggttgtacttgaaaggctttgcgtgccgggtgatgtaa
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