Serratia rubidaea: AXX16_4392
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Entry
AXX16_4392 CDS
T04417
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
srz
Serratia rubidaea
Pathway
srz00300
Lysine biosynthesis
srz00550
Peptidoglycan biosynthesis
srz01100
Metabolic pathways
srz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXX16_4392
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXX16_4392
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AXX16_4392
Enzymes [BR:
srz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
AXX16_4392
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
SnoaL_4
Motif
Other DBs
NCBI-ProteinID:
AML60062
UniProt:
A0A140F158
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Position
complement(4708155..4709516)
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AA seq
453 aa
AA seq
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MISVSLNILADVLRAELIGADGQIHEVTTDTRQVTAGCLFVALKGERFDAHDFAADAVAA
GAGALLVSKRLPVEVPQLVVADTRLALGALAGWVRQQVPAKVVALTGSSGKTSVKEMTAT
ILRECGDVLYTAGNFNNDIGVPLTLLRLQPQHDFAVIELGANHIGEIAYTTALTRPQSAL
VNNLAAAHLEGFGSLAGVAQAKGEIFQGLPADGVAIINADNNDWPRWQNLLTDQTVWRFS
PQAAEGVDFFASDITVNGNGTQFTLHTPFGRTDITLPLPGRHNVANALAATALAMSVGAS
LEAVRCGLQQLQAVPGRLFPIALAEGKLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVAG
DMAELGDDAEECHRQVGEAARLAGVDKVLSVGVLSQALSAAANNGEHFQDKAAAIARVAE
LLQEHAVITVLIKGSRSAAMEQVVRALQEKAAC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgatttccgtttccctcaacattctggccgatgtgctgcgcgccgagttgatcggcgca
gacggccaaattcacgaagtgacgacggatacccgccaggtgaccgcaggctgcctgttt
gtggcgctgaaaggcgaacgttttgacgcgcatgattttgccgccgacgcggttgccgct
ggcgcaggcgctttgctggtaagcaagcgcttaccggtagaggtgccgcagctggtggtg
gcggatacgcgactggcgctgggcgcactggcgggttgggtgcgtcagcaggtgccggcc
aaagtggtggcgctgaccggttcatcgggcaagacctcggtaaaagagatgaccgccacc
atcctgcgcgagtgcggggacgtgctgtataccgctggcaactttaacaacgatatcggc
gtgccgctgacgctgctgcgtctgcagccgcagcatgatttcgcggtgattgagctgggc
gccaaccatatcggcgaaatcgcctataccaccgcgctgacgcgtccgcaaagcgcgctg
gtcaacaacctggcggcggcgcacctggaagggttcggctcgctggccggcgtggcgcag
gcgaaaggtgaaatttttcaaggtttgccggcggatggcgtcgccattatcaacgcggac
aacaacgactggccgcgctggcagaacctgctgacggatcaaaccgtctggcgcttctcg
ccgcaggcggcggaaggcgtagacttcttcgccagcgatatcacggtgaatggcaacggc
acgcagtttaccctgcacacgccgtttggccgcacggacattacgctgccgctgccgggg
cgccacaacgtggccaacgcgctggcggccaccgcgctggcgatgtcggtaggcgcgtcg
ctggaagcggtgcgatgcggcctgcagcagctgcaggcggtgccggggcgtctgttcccg
attgcgctggcggaaggcaagctgctgctggacgacagctataacgccaacgtcggctca
atgaccgccgccgcgcaggtgctggcggagatgccgggctaccgggtgatggtggcgggc
gatatggcggaactgggcgatgacgccgaagagtgccatcgtcaggtcggcgaagcggcc
cggctggcgggcgtggataaagtgctgagcgtaggcgtactgagccaggcgctcagcgca
gccgccaacaacggcgaacattttcaggataaagcagcagcaatcgcgcgcgtagcggaa
ttactgcaggaacatgcggtcattaccgtgttaatcaaagggtcacgtagtgccgcgatg
gagcaggtagtacgcgcgttacaggagaaagcagcatgttag
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