Syngnathus scovelli (Gulf pipefish): 125978425
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Entry
125978425 CDS
T08785
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00600
Sphingolipid metabolism
sscv01100
Metabolic pathways
Module
sscv_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125978425
Enzymes [BR:
sscv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
125978425
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
BLH_phosphatase
SepSecS
Motif
Other DBs
NCBI-GeneID:
125978425
NCBI-ProteinID:
XP_049591728
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MDYWSALEVYKEMVLIYLEDVRQLVNGHCGDFEPWQLIGVTLATTLGAVWLKGFLFQQES
LLSRMKKQCFRLIRKIPFIGGPIQRQLNKALDDMSGSLCTLKNGMSYTKKLPSKGLSQSQ
VLDKISEYQTLNECQWQKGCVSGTVYWGDETLTKLLVKVYGDFAWSNPLHPDIFPGVRKM
EAEVVRMACTLFHGGPDSCGTVTSGGTESILMACKAYRDMAYERGVKYPEILAPISVHAA
FDKAAHYFGMKLVHIPLNSKTMQVDVKAMKRAINKNTAMLVCSAPQFPHGIMDPIGEVAK
LAVRYQLPLHVDACLGGFLIVFMAKAGYQLPPFDFRVKGVTSISADTHKYGYAPKGSSVI
LYSDKKYRHYQYFVAPDWQGGIYASPSIAGSRPGGIVAACWATMMHMGENGYVDATRKII
GVARKIKAEVRKTKGVFVFGDPEISVVAIGSDDFDIFRLSNALTSKGWNLNTLQYPSSIH
ICCTVLHTQPGVVERFVGDIREQVAIIMKNPKEKTTGMGAIYGMAQSIPDRSMVTEISRG
FLDCLYSTEVPKSNTSHMNGNGKAH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggattactggagtgccttggaggtatacaaggagatggtgctcatctacctggaggac
gttcggcagcttgtgaacgggcactgcggagactttgagccgtggcagctcatcggagtg
acgctcgccaccacactgggagccgtgtggcttaaaggattcctcttccaacaagaaagt
ctcctttccagaatgaagaagcaatgctttcgactcatcagaaaaatacccttcatcggc
ggcccgatccagcgtcaactgaacaaggctttagacgacatgtctggcagtctgtgcact
ctgaagaatggcatgagttacaccaaaaagttgccctcaaaaggtctctcgcaaagccaa
gtgttggacaagatcagcgagtaccaaaccttgaatgagtgccagtggcagaagggctgt
gtttcaggcacagtgtactggggtgatgaaacactgacgaaactcctggtcaaggtttat
ggcgattttgcatggagcaacccacttcatccagacatctttcccggtgtgagaaaaatg
gaggcagaggtggtcagaatggcttgcacacttttccacggcggacccgactcgtgtggc
acagtgacttcaggaggaacggagagcatactgatggcctgcaaggcgtacagagacatg
gcgtatgaacgaggtgtcaaatacccagaaatcctcgcgccaattagcgtccatgcggcc
ttcgacaaagcggcgcattacttcgggatgaagcttgttcacattcccctcaatagcaaa
acaatgcaggttgatgtcaaggctatgaagagagccatcaacaagaacacggccatgctc
gtgtgctcagcccctcagtttccacacggcattatggaccctattggagaagttgccaag
ctggccgtacgttaccagctgccgttgcatgtagatgcctgtttgggtggttttctgatt
gtcttcatggccaaggctggctaccagctcccaccgttcgacttcagggtaaaaggtgtt
acaagcatctctgcagacactcacaagtacggctacgcccccaaaggttcctccgtgatt
ctctacagtgataaaaagtaccgtcactaccagtactttgtggctccagactggcagggc
ggaatctatgcctcgccctccatcgcgggctccaggcccggaggaattgtggcggcctgc
tgggccaccatgatgcacatgggagagaatggatacgtggacgccactcgcaagatcatc
ggcgtggcgcgcaaaattaaagcagaggttcgaaagacgaaaggcgtgtttgtgttcggg
gatcccgaaatttcagtggtggcgatcggctcggatgattttgatattttccgtctgtcc
aacgcattgacgtcaaagggctggaatctgaacacgcttcagtatccatctagcatccac
atttgttgcacagttctgcacacccagccgggtgttgtggagcgctttgttggcgatatc
agagaacaggttgccatcattatgaagaaccccaaagagaaaaccacaggaatgggagcc
atttacggcatggcccagtctatcccagacagatccatggtaacggaaatctcccgaggc
ttcctggactgtctatacagcacggaggtgcccaagtccaacaccagccacatgaacggt
aacggcaaagcccactaa
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