Sphingobacterium spiritivorum: I6J01_06590
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Entry
I6J01_06590 CDS
T07566
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sspi
Sphingobacterium spiritivorum
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspi03400
]
I6J01_06590
DNA repair and recombination proteins [BR:
sspi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
I6J01_06590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
FtsK_SpoIIIE
ResIII
AAA
SLFN-g3_helicase
AAA_16
AAA_10
AAA_7
AAA_30
AAA_19
Zot
T2SSE
AAA_6
Zeta_toxin
AAA_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QQT37078
LinkDB
All DBs
Position
complement(1571313..1572854)
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AA seq
513 aa
AA seq
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MATKEQFIEKITASYQPKGAFIFLGAGIFNGEIVAEAKVNLALKMMNRHGLIAGATGTGK
TRTLQLIAEQLSNEQVPVFMLDVKGDLSGFAQEGKSNPALEERGQAIAYPFQPQNFPVEL
YSLSGNKGIPMRITIEDFGPVLLSRILDLNETQSGVLAAIFKYAGDKQMPLVDLVDLKKL
LTYLSDGPGAAEISNDYGRISSATSGTILRKIVAIEQQGLAHIFGEKEFEIQDLFQKIDG
KGVISLLNISDVQDQPLLFSTFLLSLLAQLFKNLPEVGDLDRPKLVFFFDEAHLLFNGAS
KAFLSQVEQIIRLIRSKGVGVFFCTQAATDVPETVLGQLGNRVQHALRAFTPNDAEALRK
TVKTYPHSEFYEIDKILTSLGTGQAMITVLNDKGIPTEVVATHMIGPRSVMGPVDPQTYT
DIINNSPLLQKYKESVNNRSAEEIIEEKMEEAQRAKAQQEAAKAQSASGRPASRRQTPLE
AAQKTATTTLAREGVKLLSKLANGLLTAFLKKK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggaacaatttattgaaaagattacagcctcttatcaaccaaagggagct
tttattttcctgggggcaggaattttcaatggagagatcgtcgctgaagcaaaagtaaac
ctagcgctgaagatgatgaacagacatggtctgattgcaggtgctacaggtaccggtaag
acaaggaccttacaactcattgcagagcaactttccaatgaacaggttccggtatttatg
ctggatgtgaaaggagatttatcaggctttgctcaggaaggaaaatctaatcctgcactg
gaggaaagagggcaggctattgcttacccttttcaaccgcaaaatttccccgtagaactc
tattctctcagtggcaataaagggattccgatgcggatcactatagaagacttcgggccg
gtacttttgtcccgtattctggatctgaatgaaacacagtcgggtgtattagcggccata
ttcaaatatgccggcgataagcaaatgccgttagtagaccttgttgatttgaaaaaatta
cttacttatctttcagatggaccaggagcagcagaaatcagtaatgattatggccgtatc
agttcagctacctcaggtacgatattgagaaaaatagttgccatcgagcagcaaggattg
gcccatattttcggagagaaggaatttgaaattcaggatttgttccagaaaatagacggt
aagggcgttatcagtcttttgaatatttctgatgtacaggatcagcctttgttattttcc
acatttttattaagtctccttgcacaactttttaaaaatcttccggaagtaggtgatctg
gacagaccaaaacttgtatttttctttgatgaagctcatttattgtttaacggtgcttct
aaagcattcctttctcaggtagagcagattataaggttaatacggtcaaagggggtaggt
gtattcttctgtacgcaggctgcaactgatgtaccggaaacagttcttggtcaattggga
aatcgcgtacaacatgctctgcgggcatttacgcctaatgatgccgaagcactgcggaag
actgtaaagacatatccgcattctgaattttatgagatagataaaattcttacttcttta
ggtacaggacaagccatgatcactgtattgaatgataagggtattcctacggaagtagtc
gctacacatatgataggtccgcgctctgtaatgggacctgtagatccacagacctacacg
gacattatcaataattcgcctttactgcaaaaatataaagagtctgtcaataaccggagt
gctgaagaaatcattgaagaaaaaatggaagaagcacaacgggctaaggctcagcaggag
gctgccaaagcgcagtcagcatcggggcgtccagcttccagaagacagacaccactggag
gcagcacagaaaacagccaccactacattggccagagaaggagtaaagttactaagtaaa
ctggctaacggacttttaacagcttttctaaagaaaaaatga
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