Salvia splendens (scarlet sage): 121764937
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Entry
121764937 CDS
T07627
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121764937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121764937
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121764937
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121764937
FA (Fanconi anemia) pathway
Downstream FA components
121764937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Yippee-Mis18
ResIII
Motif
Other DBs
NCBI-GeneID:
121764937
NCBI-ProteinID:
XP_042016903
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All DBs
Position
14:368162..377069
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AA seq
1242 aa
AA seq
DB search
MEDSTSPSEKPKNLKSAPKSGGRSSTNTIHIGGIPVEFPYKPYGTQLAFMNRVISTLDRA
QREGHCHALLESPTGTGKSLSLLCAALAWQQNQKLKNIRNNLTHSSSRADPQAVSDPINH
GGGFIPETQPSGNQPPATSAKKEKQRLAPIIFYASRTHAQISQVIREYKKTPYRVSMAVL
GSRKHYCTNPYLRGDEKVDEQCRLLLKNKEDSCPEYKNVHKVRGHPSLRKGGCYEVHDIE
DLVKIGQEVKGCSYFAAHSMAEEAELIFCPYNYIINPIIREGLEVNMRGSIIILDEAHNI
EDIARDGGSIDLEEESLLYLQTELGQLSLSDDTTYLPLLEMTQDILSWMDQRKTTLTKRD
FQHHFRCWTGDKASKELQEANISVQNFPILQQCAKKAIRIASEAEPDVSHLTGMASLVLE
GLFSSLSYFFSENGIHVHNFELALQRVARKDEGKGGWTNTFSLWCLNPAVVFKSIAESAQ
SVILTSGTLSPLNTFSSELGVQFGTCLEAPHIIDVDSQVWTAAISTGPGNYPLNASYKTA
DDYAFQDAVGTSLEEICKVVPGGCLVFFPSYKLLDKLSTRWQETGQWSRLNAQKSVFVEP
RGSSQDSFEATLKDYYYYISHGTRKSKGKKIRGRTLGLKNSNAVESTKDIKKEGAAFLAV
CRGKVSEGMDFSDDNARAVVIVGIPFPNVYDIKVAQKKKFNDTNEFSKNLLSGNEWYCQQ
AFRALNQAAGRCIRHRYDYGAIIFLDERFQRETNRAYLSKWLRKSIRLYNNFEESLDGLK
SFFRDVKLHTGITTSSQDLVGDSENIMPIDMKMEAKKKNNKVANAKCYQKKAEAKNASIG
EKAARLNHPTFSASRYDSPSSGTRTEVVIVPDDDDAPTCCKYIDIECNSEKRSRSSGTRL
VESSADDPELTVVKETPGINCRGETTTEVYSRDDCASPRATHLFSAFPHRSSSHPRSVQN
CLSSPTLTCSEIATPEQGTASKVDNQEPEAESRWSANSNFGKRRKINCLSSVSRLHEFSN
PEKDCRKFKPSLSTPNSPAVSRISSDHNRDEGLRLFCSHCKNPLGLPENDLLVKCSHIST
SKTHLISLLKKASEPEALIPSSVDVLVSDAPSVHPRVLTSQESACGQGIWCKEDGCVFNS
IFCPFCDQSDNCIGVHVVATDELNTQFQNKILFYRDSLEIKKFEAEMKKVAKSERVSPSH
GGSSVVENTSPNVFEKFAYTSPVQASGGWRCPKSRMRLPKKA
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccacttcgccgtcggagaaacctaaaaatctcaaatccgcccccaaatcc
ggcggccgcagctccacgaacacgatccacatcggcggaattccggtggagttcccgtac
aagccatacggcactcagctggcgttcatgaaccgagtgatctccaccctcgaccgggct
caaagagaggggcactgccacgcgctgctcgagtcgcccaccggcacggggaagtctctg
tcgctgctctgcgccgcccttgcgtggcagcagaatcagaagctgaagaatattcggaat
aatttgacccattcgagctctagggctgacccgcaggctgtgagcgacccgattaatcac
ggaggcggcttcatccctgagactcagccatcagggaatcaaccgccagccaccagtgcc
aaaaaggagaaacaaagattagcaccaatcatcttttatgcatcgaggacccatgctcaa
atcagtcaagtgatccgggagtataagaaaacaccgtacagggtctccatggcagttttg
gggtcaagaaaacattactgcaccaatccctacttacgtggtgacgagaaagttgatgaa
caatgtcggttgctactgaagaataaagaagattcatgccctgaatacaaaaatgttcat
aaagtcaggggtcatccctctcttaggaaaggtggttgctatgaagtccatgacattgaa
gatcttgtcaaaattgggcaagaagttaaaggctgttcatattttgcggcacattccatg
gctgaagaagcagaactgatcttctgcccatataactatatcatcaatccaatcatccgg
gagggactggaagttaatatgcgcgggagcatcattattttagatgaagcacacaatata
gaagacatagctcgtgatggtggtagcattgatcttgaggaggaatctttgctctatttg
cagacagaactgggacagctgagcctgagtgacgacacgacttacctacccttgcttgag
atgacacaggacatattgagttggatggaccaaagaaaaactacactgacgaagcgtgat
ttccagcaccatttccgctgttggaccggagataaagcttcaaaagagctacaagaagct
aatatatccgtgcaaaattttccaatcttgcagcaatgtgccaaaaaagcaatccgaatt
gcttcagaggctgagccagatgtttctcatttaactgggatggcatcgctagtcctggaa
gggttgttctcttcactcagctatttcttctctgagaatggcatccatgtccacaacttt
gaactggcattgcaaagagttgcgaggaaagatgaaggcaaaggtggttggaccaacact
ttcagtttgtggtgcttgaatcctgctgtcgtttttaaaagcattgctgaatctgcacaa
tcagtgattctaacttcaggaactctttcaccattgaatactttctcatctgaacttggc
gttcagtttggcacttgtctggaagccccgcatatcatagatgttgattcgcaggtgtgg
acagctgcaatctccactggtcctggtaactatccacttaatgctagctacaagactgca
gatgattatgctttccaggatgcagttggcacatctttggaggagatatgcaaagtcgtt
cctggtggttgtctagttttttttcctagctacaagctattggataaactaagcaccaga
tggcaggaaacgggccaatggtcccgattaaatgctcaaaaatctgtttttgttgaacca
agagggagcagccaagattcttttgaggctactctaaaggactactattattacataagt
catggcacaagaaagtcgaaagggaaaaagattaggggcagaacgcttggccttaaaaat
agcaacgcggttgagtccacaaaagatattaagaaagaaggggcagcttttctagcagtt
tgtcgaggcaaggtgtctgaagggatggatttctcggatgacaatgctcgagctgttgtt
attgttgggattccctttcctaatgtttatgatattaaagttgctcagaagaagaagttc
aatgatacaaatgagttctcaaagaaccttttaagtgggaatgagtggtattgtcagcaa
gcctttcgggctctaaaccaggctgccggtcgttgcattcggcacaggtatgactatgga
gctatcatatttttagacgagcggttccagagagagacaaatcgagcatacttatctaag
tggttgcgcaagtctattaggctctacaacaactttgaagaatcactagacggtttaaaa
tcattttttagagatgtgaagcttcatactggaataacaacttcatcacaagatctggtg
ggagacagtgaaaacataatgcccatagatatgaagatggaagcaaagaagaaaaacaat
aaagtagcgaatgctaaatgttatcaaaagaaagcagaagcgaaaaatgcatccattggt
gaaaaagctgctcggttgaaccacccaacattttctgcttcaagatacgattctccgtcc
agtggaactagaaccgaagtagttattgtaccagatgatgacgatgctcctacttgctgc
aagtacattgacatagagtgtaattctgaaaagcgatccagatcatctggaacacgtttg
gtggagtcgtctgcagatgatcctgagcttaccgttgttaaagaaacgccagggataaat
tgcaggggcgagacaactactgaggtctactcaagagatgattgtgcaagtccgagggca
acccatttatttagtgcatttcctcatcgatcttcttctcatccaagatctgtccaaaac
tgtctttctagccctactctcacatgttcagaaattgccactcccgagcaaggaactgct
tctaaagtagacaaccaagaacctgaagcagaatcacgctggagtgccaattcaaatttc
ggaaaaagaagaaagatcaactgtttgtcatcagtcagccgtctccatgagtttagcaat
cctgaaaaggactgccgaaaatttaagccatctctctcaacaccgaatagtcctgctgta
tcccgtatctcttctgatcacaacagagacgagggactacgattattctgctcacactgc
aaaaacccattgggccttccagaaaatgatttactagtaaagtgctctcacatttcaaca
tcaaaaactcatttgatatctcttctgaagaaggcttcggaacctgaagctttaataccg
tcaagcgtggatgttttggtatctgacgcgccatcagtccatccacgtgtcctcacatct
caggaaagtgcttgcgggcaggggatttggtgcaaggaagatggatgcgtgttcaactct
atattctgccccttctgtgaccagtcagacaactgcattggtgttcatgtggtggccacg
gatgaattgaatacgcagttccaaaataagatattattctaccgggatagcttggagatc
aagaagtttgaagcagagatgaagaaagttgcaaaatcagaaagggtttcgccttcacat
ggtggctcaagtgtggttgaaaacacaagtcccaacgtgtttgagaagtttgcatatact
tcaccggttcaagcttctggaggttggaggtgcccgaaatcacggatgcgcctgccaaag
aaggcatag
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