Sutterella faecalis: FG381_04505
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Entry
FG381_04505 CDS
T06027
Name
(GenBank) S1 RNA-binding domain-containing protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
sutk
Sutterella faecalis
Pathway
sutk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sutk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FG381_04505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sutk03019
]
FG381_04505
03009 Ribosome biogenesis [BR:
sutk03009
]
FG381_04505
Enzymes [BR:
sutk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FG381_04505
Messenger RNA biogenesis [BR:
sutk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FG381_04505
Ribosome biogenesis [BR:
sutk03009
]
Prokaryotic type
rRNA processing factors
FG381_04505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QDA54274
UniProt:
A0A5B7ZGQ7
LinkDB
All DBs
Position
1136546..1140043
Genome browser
AA seq
1165 aa
AA seq
DB search
MKRMLFNATHPEETRVGIVDGQKLIDIDIETAGREARKSNIYKGVVTRIEPSLEACFVDY
GEERHGFLPFKEISRSYFAEGVDVRMATIKEAIREGQELIVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRAGGVSRRIEGEERQELREAMDKLDIPSGMSTIARTAGIGRTTEELQ
WDLNYLLKLWNAIVDAARPQYEYVTEENGRKVRSVSSEPTKNGRSGKCLNPAPFLIVEES
NLVVRAIRDYFQPEIGEILVDTDEIYEQARQFMANVMPDMVDRVKRYRDDIPLFTRFQIE
QQIETAYSRTVPLPSGGAIVIDHTEALVAIDVNSARATRGADIEDTAFRTNCEAADEVAR
QMRLRDLGGLIVIDFIDMAESKNQRAVEQRLKDAIRYDRARVQTAKISRFGLMELSRQRL
RPALSEGSHITCPRCNGVGVIRDTESCAIQVLRILQEEAMKEGTGAVQAQVPVDVATFLL
NEKRNDITKLEARHRVPIVLVPNTYLETPHYHIERIRQDDERLDTHVPSFDLAEEIETTA
DDPYAQKSQEEKPQRPKQVPVIKNLIERDPAPVHAAEAQKEEKAQKPDAGKVKQLTPVTP
QKSLFQRIIAFFTGGDSTEKKTEEKPQQKPAEKTDERRRTRGGRNDRRTRSGRTRTERTE
RLERAERSDRSEKTERSERPERSERTERAERTEKTEGRSRRTRTDRADRSERTERAERAP
RTERTERSDRDDRRQERRTEESARPAEDIATMTAESLPDAVNQTEVEAPVFTVEQESGDE
ERRSRRRRSRRRPAEDEALADRIPEAEETQEGAAAPQPALAEVISLDEGIVESDKAAEQS
EAREESDEEGARRRRPRRRRRSGRGAEAQEGAEAQSAQPAEPQGLAAEVAQQPVWTPAAE
PLVQIETKSAVSQAVEGAFAGAQTEGSAHDGERRRSRRSRKPRTEAQADRIPEAKETKEG
AAASSPVLAEVISLDEGIVEGEKAAERAEVREEEKPAAPQEKAVKAPEPEEKLIQIETRK
APEAAPEVPAPEAAPATTPEAPTKAAAAAAEAPAAPAAEPQTEHPALTGSIAEGLEDNLR
SAGLVQVHTAKPSAATGYEPVVQPGRVVEHAAAEAEEGPLTQVHTKPELCRPVDYAPVIQ
PGRKVESSVEASEAEVLVQVETKKN
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcatgcttttcaatgccacgcatcccgaggaaacgcgcgttggcattgtcgac
ggccagaagctgatcgacatcgacattgagactgccggccgcgaagcccgcaagtcgaac
atctacaagggcgtcgtcacccgcatcgagccctctcttgaagcctgcttcgtcgactat
ggcgaagagcgtcacgggttcctgccctttaaggaaatctcgaggagctacttcgccgaa
ggcgtcgacgtccgcatggcgaccatcaaggaagccatccgcgagggtcaggagctcatc
gtccaggttgagaaggaagagcgcggcaacaaaggcgccgcactcacgaccttcatcagc
ctcgcgggccgctatctggtgctcatgcccaacaacccgcgcgcgggcggcgtctcgcgc
cgcatcgagggcgaggagcgtcaggaactgcgcgaagcaatggacaagctcgacatcccg
agcggcatgtcgaccattgcccgcactgccggcatcggccgcacgaccgaggagcttcag
tgggacctcaactacctcctgaagctctggaatgcgatcgtcgacgctgcgcgcccgcag
tacgaatacgtgacggaagaaaacggccgcaaggtccgttcggtctcgtccgagcccacg
aagaacggcagaagcggcaagtgccttaatcccgctcccttcctcatcgttgaggaatcg
aaccttgtcgttcgtgccattcgcgactacttccagcccgagatcggcgaaatcctcgtc
gacacggatgagatctacgagcaggcgcgccagttcatggcgaacgtcatgcccgacatg
gtcgaccgcgtgaagcgctaccgcgacgacattccgctcttcacgcgcttccagatcgag
cagcagatcgaaaccgcctactcgcgcaccgttccgctcccctcgggcggcgcgatcgtc
atcgaccacacggaagcgctcgtcgcgatcgacgtcaactccgcccgcgccacccgcggc
gccgacattgaggacacggccttccgcacgaactgcgaagccgcggacgaagtcgcccgc
cagatgcgcctgagagacttgggcggcctcatcgtgatcgacttcatcgatatggccgaa
tcgaagaaccagcgcgcggtggagcagcgcctgaaggacgccatccgctacgaccgcgcc
cgcgtccagacggcaaagatcagccgcttcggcctgatggagctctcgcgccagcgtctg
cgtccggccctctccgaaggcagccacatcacctgcccgcgctgcaacggcgtcggcgtc
atccgcgacaccgagtcctgcgcgatccaggtgctgcgcatcctccaggaagaggccatg
aaggaaggtaccggcgccgttcaggcccaggtgcccgtcgatgtcgccacgttcctcctc
aacgagaagcgtaacgacatcacgaagctcgaagcgcgccaccgcgtgccgatcgtgctc
gttcccaacacctaccttgagaccccgcactatcacatcgagcgcatccgtcaggacgac
gagcgcctcgatacgcacgttccgagcttcgacctcgccgaggaaatcgaaacgacggcc
gacgacccgtacgctcagaagtctcaggaagagaagccccagcgtcccaagcaggttccc
gtcatcaagaacctgatcgagcgcgacccggctcccgtccatgcggctgaagcccagaag
gaagagaaggctcagaagcccgatgccggcaaggtgaagcagctcactccggtcacgcct
cagaagtccctcttccagcgcatcatcgccttcttcacgggcggcgacagcacggaaaag
aagaccgaggagaagcctcagcagaagcccgctgaaaagacggacgaaaggcgccgcacc
cgcggcggcaggaacgaccgccgcacgcgttcgggccgcacccgcacggagcgcaccgaa
cgtctcgagcgcgcggaacggagcgatcgttctgaaaagacggaaaggtctgaaagaccc
gagcgttcggaacgtacggaacgcgctgaacgcacggagaagaccgaaggccgcagccgc
agaacgcgcaccgatcgtgcggaccgcagcgaacgcacggaacgcgccgagcgcgcgccc
cgcacggagcgcactgagcgcagcgaccgcgacgatcgtcgtcaggaacgccgcacggag
gaatccgctcgtccggccgaagacatcgcgaccatgacggcagaaagccttcccgatgcc
gtgaaccagacggaagtcgaagcgccggtctttacggtcgaacaggaatcgggcgacgaa
gagcgtcgttctcgccgccgccgttcgcgccgtcgtcccgcggaagatgaagccctggcc
gaccgcattccggaagccgaggaaacccaggaaggtgcggccgctcctcagcccgcactc
gccgaagtgatttcgctcgacgaagggatcgttgagagcgacaaggctgccgaacagtcc
gaagcccgcgaggaatcggatgaggaaggcgcccgccgccgccgtccgcgccgccgccgt
cgttccggccgcggcgctgaggcgcaggaaggcgctgaagcgcagtcggctcagccggca
gaaccccaggggcttgccgctgaagtcgcccagcagcccgtctggacgcctgctgcggaa
ccgctcgtgcagatcgaaaccaagtccgcggtctctcaggccgtcgaaggcgcctttgcc
ggcgctcagacggaaggcagcgctcacgacggcgaacgccgccgcagccgccgctcgaga
aagccccgcacggaagcccaggccgaccggatccccgaggcgaaggaaacgaaggaaggc
gctgccgcctcctcgcccgtcctcgctgaagtgatttcgctcgacgaagggatcgttgaa
ggcgagaaggccgctgagcgcgctgaggtccgcgaggaagaaaagcccgcagcgcctcag
gagaaagccgtgaaggcgcccgaacccgaagagaagctcattcagattgagacccgcaag
gctcctgaagcggctcccgaggttccggcaccagaagcggctcccgcgacgacgcctgaa
gcgccgacgaaagctgctgcagctgcagcggaagcgcctgccgcacctgctgcggaacct
cagactgagcatcccgcgctcacgggctccattgcagagggccttgaagataacctccgc
tcggcaggactcgtgcaggttcacactgcaaagccctcggcggccacgggctatgagccc
gtggtccagcccggccgcgtggtcgagcacgccgcagctgaagccgaggaaggccccctc
acgcaggttcacacgaagcccgagctctgccgcccggtcgactatgcccccgtcattcag
ccgggccgcaaggtcgagtcgagcgtcgaagcctctgaagccgaagtgctcgtgcaggtg
gaaacgaagaagaactaa
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