Tolumonas auensis: Tola_2201
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Entry
Tola_2201 CDS
T00904
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
tau
Tolumonas auensis
Pathway
tau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tola_2201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tau03019
]
Tola_2201
03009 Ribosome biogenesis [BR:
tau03009
]
Tola_2201
Enzymes [BR:
tau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Tola_2201
Messenger RNA biogenesis [BR:
tau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tola_2201
Ribosome biogenesis [BR:
tau03009
]
Prokaryotic type
rRNA processing factors
Tola_2201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ACQ93800
UniProt:
C4L8F4
LinkDB
All DBs
Position
2408095..2410947
Genome browser
AA seq
950 aa
AA seq
DB search
MKRMLINATQEEELRVALVDGQRIYDLDIENPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPENYTFHGRPNIKEVIKEGLEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDERTELKEAMNGLEVPSGMGLIVRTAGVGKSQEEL
EWDLNILLKHWNAIKTASSNRAAPFLIHQESNVIVRAIRDYLRRDIGEILIDSETIFERA
KQHIELVRPDFVNRVKLYKSEIPLFTHFQIESQIESAFQREVRLPSGGSIVIDPTEALTS
IDINSSRATKGGDIEETALQTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVEN
RLRDAVRQDRARIQLGRISRFGLLELSRQRLRPSLNESSTHVCPRCSGQGFIRDNESLAL
SILRLIEEEALKDNTEQVIAQVPVDVAAYLLNEKRQAVLTLEQRHKVQLLIIPNTRLETP
HFEVSRFRSGEESDALSYELKTEAPVEEYQPKPQQIIAPAEQPALQGFVAPSVPAPTPVN
TPTPVVAKPAAEGLLSRLFGFIGALFKGSAETQVAEEKPPVKERPQPRRRDNRNNNRKRN
TSYAARNREEDVAGTAAPEEKTQTTPVRQPRRPRQDRAERTDRPSVRDNNVEKESPAVKP
ERTPKERKPRNEVPAPAAVAEEQQDVSRKEQRVEERRERRNMRKKVRISDETVQTEIVAA
KPETETVVAEAQPRTRRRRNNAERNAEEKAIQTVTSTETVSEAPVQEQAVETVVVTEVIP
QQQADALPQVVVSESPVETPVVAETSLVAEPAEKTEVTVIESPEAAVVTEQAASDMQTTA
ETIIAVEIAAPVVVIAEPVAVEETVKSEPVVISTATAVVVNKPKAHGLIERVRFANAAMT
RPAEMPLPPAQPKGDYPPYERKPVNGSGRAAGTSTLKQQASAPAGRPEAR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgcttattaacgcaactcaggaagaagagttgcgtgtagccctcgttgat
gggcagcgtatttatgatctggatattgaaaatccgggccatgagcagaaaaaagccaac
atttacaaagggaaaatcactcgtatcgagccaagtctggaagcagccttcgttgattat
ggtgctgagcgccatggtttcctgccgctcaaagagattgcccgcgaatattttcctgaa
aactataccttccacggtcgccctaatatcaaagaagtgatcaaagaaggtttagaagtt
atcgttcagattgataaagaagaacgtggcaataaaggtgctgcgttaactacctttatc
agtctggctggcagctatctggttctgatgccgaataacccccgcgccggtggtatttcc
cgccggattgagggtgatgaacgtactgaactgaaagaagccatgaacggtctggaagtc
ccgtccggaatgggattgattgttcgtaccgcaggcgtcggtaaatcacaggaagaactg
gagtgggatctgaatatcctgctgaaacactggaatgctatcaaaacagcatccagcaac
cgggcagcgccattcctgatccatcaggaaagtaacgttattgttcgcgctattcgtgac
tatctgcgccgggatatcggtgaaatcctgattgatagtgaaaccatttttgaacgagct
aaacaacatattgaattggttcgtccggatttcgtcaatcgcgtaaaactgtataaaagt
gaaattccacttttcactcatttccagatcgaaagtcagattgaatctgctttccagcgt
gaagtgcgtttgccatccggtggttcaatcgttattgatccgaccgaagcgctgacttct
attgatatcaactcatcccgggcaaccaagggtggtgatattgaagaaacggctctgcaa
accaatctggaagcagccgatgaaatcgcccgtcaattgcgtctgcgcgatttaggtggg
ttgatcgttatcgactttatcgatatgacgcctgtccgccatcagcgtgaagttgaaaat
cgtctgcgtgatgccgtgcgtcaggatcgtgcacgtattcagttaggccgtatttcccgc
ttcgggctgctggaattatcccgtcagcgtttacgtccttcactgaatgagtccagtact
catgtctgcccgcgttgcagtggtcagggtttcatccgtgacaatgaatcgctggcactg
agtatcctgcgtcttatcgaagaagaagcactgaaagataatactgagcaggttattgct
caggttcctgttgatgttgccgcttatttgcttaacgaaaaacgtcaggcagtgctaacg
ctcgaacaacgccacaaagttcagttgctgattattccaaatactcgtttggaaacgcca
cactttgaagtgtctcgtttccgttcaggcgaagaaagcgatgcactcagttatgaatta
aaaactgaagctccggttgaagaatatcaaccaaaaccacagcagattattgcaccggca
gaacaaccagccttgcagggtttcgttgcaccgagtgtaccggctccaacgccagttaat
accccaactccggttgtcgcaaaaccagcagctgaaggtttactgtcacgcctattcggc
tttattggtgcattatttaaaggttctgctgaaactcaggtagcagaagaaaaaccaccg
gttaaagagcgtccgcaaccgcgtcgtcgtgataaccgcaataataaccgtaaacgtaat
acctcctatgctgcgcgtaaccgtgaagaagatgttgctggtactgcagcaccagaagaa
aaaactcagaccactccggttcgtcagcctcgtcgccctcgacaagaccgggcggaacga
actgaccgaccttctgtacgtgacaataacgttgaaaaagagtcgccagcagttaaacct
gagcgtacgcctaaagaacgtaagccacgcaatgaagtacctgcacctgctgcagtggct
gaagaacaacaggatgtatcccgtaaagaacagcgtgttgaagaacgtcgtgaacgccgc
aatatgcgtaagaaagtacggataagcgatgaaacagtccaaactgagattgttgcagcg
aagcctgaaactgaaacagtagtggcagaagcacaacctcgtacacgccgtcgccgcaat
aacgctgaacggaatgcggaagaaaaagcaattcagactgtaacgtccaccgagacagtt
tctgaagcaccagttcaggaacaggctgtggaaacggtagttgtgacagaagtaattcca
cagcaacaagctgatgctttgcctcaggtagtcgtttctgaaagccctgttgaaacacca
gttgttgcggaaacatcgctggtagcagaacctgcagaaaaaaccgaagtgacggtgatt
gagtcacctgaagcagcggtagttactgaacaggctgcttctgatatgcagacaacagca
gagaccattatcgctgtggaaatagcagcacctgtcgttgtgattgctgaacccgtagca
gtggaagaaacagttaaatcagaacctgttgttatcagcaccgcaactgcggttgttgtt
aataaacccaaggctcatggtttgattgaacgtgtccgttttgctaatgctgcaatgact
cgtcctgccgaaatgcctttaccaccagctcagccaaaaggagattatcctccttatgag
cgtaagccggtaaatggtagtggccgtgcagcaggcacttctactctgaagcaacaggca
tcagctccagccggacgccctgaagcccgataa
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