Trematomus bernacchii (emerald rockcod): 117480687 Help Entry 117480687         CDS       T09643                                  Symbol nphs1 Name (RefSeq) nephrin isoform X1   KO K24496   nephron Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:tben04990]     117480687 (nphs1) Domain-containing proteins not elsewhere classified [BR:tben04990]  Fibronectin (FN) domain-containing proteins   Fibronectin type III domain-containing proteins    117480687 (nphs1) BRITE hierarchy Motif Pfam:  Ig_3 C2-set_2 I-set Ig_2 ig V-set C1-set fn3 Motif Other DBs NCBI-GeneID:  117480687 NCBI-ProteinID:  XP_033983996 EnsemblRapid:  ENSTBNG00005003316 LinkDB All DBs Position Unknown AA seq 1203 aa AA seqDB search MGATAVLRCEVLRASGTVQWVKDGLLLGPQRSLPGFERYSMIGNLKRGQHHLQIEKTLLE DEASYECQAGRSDSSQAIISSTAWIFMLIPPSKPYLMVDMATPWVAGSKYTVTCIAPDSK PMADITLYKDGVELTGAQSFTMSGSKDKLLNTHAEVTVTAVSSDNGRQLACHAQNPALFR PVETTMTMMVHYPPQPPVILGLEREEVKEGRTLVLECVSHGGNPLATLQWTKNEEVLSTT WEEDVVAQKSSSILFMKIRPTDNQAVLCCESVNMVSSSPLSVSRKITVLFEPAEVTLLGS FTAIEGQDINMGCYATSSNPPVQIRWWLGYKELNTSGEAMEEGDNGGMTTVSNMTHRVSR EDDGLKLTCEAFNKGTHFSKTQFDILNVYYPPQNVWLDTPLSDVPPRSGTTVRLVCFSTG GNPTATLTWFKNGRAVHDALRQTSFERGVARELILVLTPSDNMATFRCDAINKAKKTISA QTKFKVHFLAVSMKISTKQEVQRQGQMLTLECQSGSSNPQPSIRWSLDTVSRLQGVEQPP RRAHFGGVSVQSSLSLNLSSLHHNKRVICQAYTPELAEGANTFFKLNVHYPPEFSPKQPA QIQVLEDDMAVIPLLLSANPEEVSCIWLHRRETLVREGSLRFHRSDDNSLEIKNVTRKHA GVYTVKCTNEEGVNQASIMLDVLYAPSVKAEKDPVLVNLGETADLICVADANPIISGMFT WKWLGEGEVEMGEENQQDESGLLTIHDVTRAHAGLYQCSANNDIAPPATVEVQLVVQFKP NLQKGAQWTKVASRGDGTTTAEVVCQAEGIPRVDFSWEKKGVRMDFANPRYEERTVREGS FHTSTVRVVNVSTNLDYAVFSCTARNSLGEDTLHIQLVSTNHPDPPSSFGQVDVSHDSVT LEWIPSFNGGLRQRFRVRYRWDQSDSFLYVDVFPPGAPTFTVTGLQPVTSYNFSVNALNA MGESAYADNNAVLTITTKERPEGVLTDDDSVSQSASGLPTYLTVVFTVVFGVLLVFNSVG CFFGLRWKRRRGQTGGRGGSGLDGKKNKEEGGSHSTVSTSNKYESREKINTAAQRTLLID SGSETDSHVYESYAAGSSHYYYPSGDYMPPLNPHPEETRRHDVTRLPVDPHSHLYEDVRD KGLYQDILASTLPSPPSLFDHRLPHQRNEARSKAYPQAAERARDVPQPPRDSHLPFEQRG ELV NT seq 3612 nt NT seq  +upstreamnt  +downstreamnt atgggagccacagctgtgttgaggtgtgaggtgctccgggcctcagggactgtgcagtgg gtgaaagatggcctcctcctgggaccacagagaagcctgccaggctttgagcgctacagc atgattggaaacctcaagagaggacagcatcatctgcagattgagaagaccttgctggaa gatgaagcttcatatgaatgtcaagcgggccgatctgatagcagtcaagctatcatttcc agcacagcatggatcttcatgttaattcctccctccaagccgtaccttatggtggacatg gcaaccccctgggtggcagggtccaagtacacggtcacctgtatcgcccctgactcaaag cccatggctgatatcacactctataaagatggagtggagctgacaggtgcacagtctttc accatgtctggctcaaaggataagctcctgaacacgcatgccgaagtaacggtcactgct gtgagctctgacaacgggaggcagctggcatgtcatgcacagaaccccgccctcttccgg cctgtggagaccacaatgaccatgatggtgcactacccacctcagcctccagttattttg ggtctagagagagaggaagtcaaagagggaagaacgctcgtgttggagtgtgtgtctcat ggtggaaaccccctagccactctccaatggaccaagaatgaagaagttctctcaacaacg tgggaagaggacgttgtggcgcagaagtccagcagtatcctcttcatgaaaatccgtcca acagacaaccaggcagtgttgtgctgtgaaagcgtcaatatggtgtcttcgtcacctctt tctgttagccgcaaaatcactgtgctctttgagcctgcagaggtgacacttttggggtcg ttcacggccatcgaggggcaggacataaatatgggctgctacgccacctccagtaatcca cctgtccagatccgctggtggctgggctacaaggagctcaacacatccggagaagctatg gaagagggagacaatggtgggatgacaaccgtgtccaacatgacccacagggtctcccgg gaggacgacggactgaaactcacctgtgaggctttcaacaaggggacacacttctccaag acccagttcgacatactcaatgtctactatccccctcaaaatgtatggctcgataccccc ctttcagatgtccctccacgttcaggcaccacggtccgtctcgtctgcttctccactgga ggcaatcccactgcgactctgacttggttcaagaatggaagggcagtccacgatgcactg aggcagacgtcctttgagcggggtgtggctcgagaactgatcctggttctgacgccaagt gacaacatggccaccttccgctgtgatgccataaataaagcaaagaagaccatttctgcc cagactaagttcaaggttcacttcctggcagtaagtatgaagatctcaaccaaacaggag gtgcaacgtcagggacagatgctaactctggagtgccagtctggaagcagcaacccccag cccagcatccgctggagtttggacacagtcagtaggttacagggagtggagcagcccccc aggagggctcattttggtggtgtgtcagtgcagagttccctatccctaaatctgagttca ctgcatcacaacaagcgtgtcatctgccaggcctacactccggagctagctgagggggct aacacattctttaaactaaatgtgcattacccaccagaattcagccctaagcagccggcg cagattcaggtgttggaggatgacatggcagtcatcccattgctgctctcagctaacccg gaggaggtctcctgcatttggctgcaccgcagggagacgctggtcagagaggggagtctg cgcttccaccggtcagacgacaactccctggagatcaagaacgtgacaaggaaacatgct ggagtttacacggtcaagtgtacaaacgaggagggcgtcaaccaagcctccatcatgctg gatgttctgtatgctcccagtgtcaaggcagagaaagaccctgtgttagtgaacctgggg gaaacagcagacctaatatgtgtggcagatgccaaccccattatatctggcatgttcact tggaaatggctgggagaaggggaggtggagatgggagaggagaaccagcaagacgaatct ggccttctgaccatccatgatgtgactcgtgctcatgctggtctttaccagtgctcagcc aataacgacatagcaccccctgccactgtagaagtgcagctggtagtacaattcaaacct aatcttcagaaaggagcccaatggacgaaggtagcaagtagaggcgatggcaccacaacg gctgaggtagtgtgtcaggccgaagggattcctcgcgtcgacttctcttgggaaaaaaaa ggtgttcgcatggactttgccaacccgaggtatgaggagcggaccgtgagggagggctcc tttcacaccagcacggttagagttgtaaatgtgagcacgaacctggactacgctgtcttc agctgcacggctcgcaactcgctcggggaagacacgctccacatccagctcgtcagcaca aatcacccagatcctccttcatcgtttggccaagtcgacgtctcccacgactcggtcact cttgagtggatccccagcttcaacggtggtctgcggcaaaggtttcgtgtaagataccgt tgggatcagtcagacagttttctgtatgttgatgtctttcctcccggagctccaaccttc acggtcaccggcctgcagcctgtcaccagctacaacttctctgtcaatgccctcaatgca atgggagagagtgcctatgctgacaataatgcagtactgaccatcaccaccaaggagagg ccagaaggagtcctaacagacgatgactcagtctcacagagtgcaagtggcctgcccacc tacttgacagtagtgttcaccgtggtgtttggagtcctgctggtgtttaattcagtgggt tgcttctttggtttgaggtggaaaaggaggcgaggccagacagggggtagaggaggcagt gggcttgatggaaagaagaataaagaggaggggggtagtcattcaactgtaagcacctcc aataagtatgagagcagagagaagatcaacacggcagcccagcgcaccctgctcatcgac tccggatctgagacagacagccacgtctacgagagctatgcagcgggaagttcccattat tattaccccagcggtgactacatgccgcctctgaaccctcaccctgaggaaacacgcagg cacgatgtcacccgcctccctgtggaccctcacagccatctgtatgaagacgtaagagac aagggtctgtaccaggacatcctggcttccacacttccttcccctccatccttgtttgac cacagactgcctcatcagaggaatgaggcgagatcaaaagcataccctcaggctgctgaa agagcgagggatgttccacaaccgccgagagattcccatcttccctttgaacaacgaggc gaattagtctag

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