Tigriopus californicus (tidepool copepod): 131880526
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Entry
131880526 CDS
T09700
Name
(RefSeq) histone deacetylase 3-like
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131880526
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
131880526
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
131880526
HDAC complexes
SMART complex
131880526
BRITE hierarchy
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
131880526
NCBI-ProteinID:
XP_059083166
LinkDB
All DBs
Position
5:8864483..8866667
Genome browser
AA seq
437 aa
AA seq
DB search
MPSSNTRVVYFYDPDVGNFHYGPGHPMKPHRLSVTHSLVLNYGLHKSLKVFRPYIATAHD
MARFHSEEYIEFLQRVTPQNIQGFTKSLSHFNVGDDCPVFDGLYEFCARYTGASMEGAAK
LNNEGCDIAVNWSGGLHHAKKFEASGFCYVNDIVIGILELLKVHPRVLYIDIDIHHGDGV
QEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAEVGRYYSVNVPLKEGMDDLSYELVFK
PVVKDVIDFYRPTAIVLQCGADSLANDRLGCFNLSIKGHGECVSFVKKFNIPTLVLGGGG
YTVRNVARCWTYETSICVDKDLSDELPYNTEYFEYFSPDFSLHPDVNPRSENANSKQYLD
SIVESMHTQLKMVQHAPSVQMQDMPGTIYPDDHDHLDDLDPDVRNHEIEEERRTEAENEF
YDGDRDQDGPTEDLPAK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctagcaacacgcgggtggtctatttctatgacccggacgtgggcaacttccat
tatgggccgggtcatcccatgaagccgcatcgcttgagcgtaacccattcgttggtgctc
aactacggacttcacaagtcgctcaaggtgtttcggccctatatcgccacggctcatgat
atggcccgcttccactccgaggagtacatcgaattcctccaacgcgtcacgccccaaaac
atccagggcttcaccaagagcttgtctcactttaacgtgggcgacgattgccccgtgttt
gacggcctgtacgagttctgcgcccgctacaccggcgcctccatggagggcgcggccaag
ctcaacaacgagggctgcgatatcgccgtcaattggtcgggtggactgcatcatgccaag
aagttcgaagcctcgggcttttgctacgtcaacgatatcgtgattggtattctggaattg
ctcaaagtccatccgcgtgtcctttacatcgacatcgacattcaccacggtgatggcgtg
caggaggcattctatctcacggatcgcgtcatgaccgttagcttccacaagtacggcaat
tacttctttcccggcacgggcgacatgtacgaaatcggggcggaagtggggcgttactac
tcggtcaatgtgcccttgaaagaaggcatggacgatctgagctacgagttggtctttaag
cccgtggtcaaggacgtcattgacttctatcggcccacagccatcgtattacagtgcggg
gccgattcgctggccaacgaccgattgggctgcttcaatctcagcatcaaaggccacggg
gaatgtgttagtttcgtcaagaagttcaatatcccaacgctggttttgggtgggggtggg
tacacggtgcgcaacgtggcccgttgttggacctacgaaacgtccatttgtgtggataag
gatctgtccgacgagctaccttacaacaccgaatacttcgagtacttctcgcccgacttc
agcctccatcctgatgtcaacccgcgctcggagaacgccaattccaagcagtatctagat
tcaatcgtcgaatccatgcacacccaacttaagatggtccaacatgcgcccagcgttcag
atgcaggatatgcctggaacgatttatcccgatgatcacgatcacttggacgacctggat
ccggatgtgcgcaatcacgagatcgaggaagagaggcgcactgaggcagaaaacgaattt
tacgatggtgaccgagatcaagacgggcccaccgaagatttgccggccaagtaa
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