Thermanaerosceptrum fracticalcis: BR63_15775
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Entry
BR63_15775 CDS
T06762
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tfr
Thermanaerosceptrum fracticalcis
Brite
KEGG Orthology (KO) [BR:
tfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfr03016
]
BR63_15775
Enzymes [BR:
tfr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BR63_15775
Transfer RNA biogenesis [BR:
tfr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BR63_15775
Prokaryotic type
tRNA splicing ligases
BR63_15775
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RtcB
Arm-DNA-bind_2
Motif
Other DBs
NCBI-ProteinID:
QNB48471
UniProt:
A0A7G6E8R7
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All DBs
Position
3106368..3107720
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AA seq
450 aa
AA seq
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MQVDAYIYLSEKLLPYLEDEAIKQLTDAASLPGVYRRVVGMPDIHTGFGLPIGGIMATEK
DGVISAGAVGMDINCGVRLLMTEIPHTEINKKHLTTLLKEIEKRIPVGVGKKSRHSGFKL
EDVLKGGASFLAKKGYGLPDDLMCCEEEGCMPGANPDKVSSRAKERGDQLSTLGGGNHFM
EIVYVAQVYDEHTARNFGLRQGNIAVLIHTGSRGLGHQVCTDYTEIMYKAAKRYGISLPS
KGLAAVPIDSPEGQDYYEAMASATNFAFANRQLITYDVREAFCQVFNSNLEELGLKLVYD
VCHNIAKFEQYDGRQLLVHRKGAVKALPPGHPGLSPRFLGTGNPVLVPGSMGNPSYVVVG
TEKARDTFYSVNHGAGRILSRTAARRNISPDELKAQIGDTLVNVDRLGKILDEAPQAYKD
VEEVIDTLVVAGLTRKVVQLKPLAVIKGEE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtagatgcctatatttatttaagtgaaaaacttcttccttatctggaggatgaa
gccatcaaacagttaactgatgcggcctccctgcccggtgtttaccggcgggtagtgggt
atgcctgatatccatacgggatttggtctgcccattggcggtatcatggccacagaaaag
gatggtgtgatttcggcaggggctgtgggaatggatatcaattgcggcgtcaggttattg
atgacagaaattccccatacggagataaataagaagcacttaactaccctgctaaaagaa
atagaaaaaaggatacctgtaggggtaggaaagaaaagccggcattccgggtttaaactg
gaagatgttcttaaaggaggggcttccttcctggcgaagaaagggtatggcctccccgat
gacctgatgtgctgtgaagaagagggatgtatgcccggggccaatcccgacaaagtaagt
tccagggctaaagagcggggagaccagctttccactttgggcggcgggaaccactttatg
gagattgtttatgtggcccaggtttatgatgaacatacagcacgcaattttggattgcgt
caaggtaacattgccgtgttgattcataccggcagccggggattggggcaccaggtctgt
accgattataccgagattatgtataaagctgccaaaaggtatgggattagcctgcccagt
aaaggtttggcggctgtgcctattgactcgccggaagggcaggattattatgaagctatg
gcaagtgctaccaatttcgcttttgccaaccgccagttgattacttatgatgtacgggaa
gctttttgccaggtctttaacagtaatctggaagagctggggcttaaactggtgtatgat
gtctgccataatatagccaagtttgaacagtatgatggacggcaactcctggtccaccga
aagggggcggtgaaagccctgccgccgggacatcccggcctgtccccccgttttctggga
acaggaaacccggtcctggtaccgggcagtatgggtaacccctcctatgtggtggtggga
acagagaaagctagagataccttttactctgtaaaccatggggcaggacgtatcctttcc
cgcacagcggccaggaggaatatttcacctgatgagttgaaggcccaaatcggagatacc
ttagtaaatgtggacaggctggggaaaatactggacgaagcgcctcaagcctataaagat
gtggaagaggtcatcgataccttagtggtggccggccttacccgtaaggttgtccagttg
aaacccctggctgttattaaaggtgaagaatga
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